Kryptolebias marmoratus (mangrove rivulus): 108246556
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Entry
108246556 CDS
T05608
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108246556 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
kmr04030
]
108246556 (valopa)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108246556 (valopa)
G protein-coupled receptors [BR:
kmr04030
]
Rhodopsin family
Vision
Opsin
108246556 (valopa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srw
7tm_4
Motif
Other DBs
NCBI-GeneID:
108246556
NCBI-ProteinID:
XP_017289664
UniProt:
A0A3Q3AW02
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All DBs
Position
LG22:complement(29108598..29117192)
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AA seq
381 aa
AA seq
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MEPPSASVNAAVPHAEADPFRGPVPNVAPWNFTVLAVLMFVVTSLSLTENFLVMFVTFRF
RQLRQPLNYIIVNLALADFLVSLSGGLISFLTNARGFFFLGQWACVLEGFAVTFFGIVAL
WSLAVLSFERFFVICRPLGNIRLQSKHAVLGLLFVWTFSFIWTFPPVLGWNRYTVSKIGT
TCEPDWYSTNMTDHSYIITFFATCFILPLGVIFFCYGKLLRKLRKVSHGRLASAKKPERQ
VTRMVVVMIVAFMVGWTPYAAFSILVTAHPTVQLDPRLAAIPAFFSKTAAVYNPIIYVFM
NKQFRKCLIQHFTGVGIIPDSNLNQTSERPGITAETHTGEMSAIAARIPVSVAAASRSED
SQTDGGQFLQLPIPENKVCPL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagcccccgagcgcgtccgtgaacgcggcggtgccgcacgccgaggcggacccgttc
cgcggacccgtcccgaacgtggcgccctggaacttcacggtgctggcggtgctgatgttc
gtggtgacgtccctgtccctgacggagaacttcctggtgatgttcgtcaccttcaggttc
cggcagctgcggcagccgctcaactacatcatcgtgaacctcgcgctggcggacttcctg
gtgtccctgtccggaggactcatcagcttcctgaccaacgcgcgcggcttcttcttcctg
ggccagtgggcgtgcgtgctggagggcttcgctgtcacgttctttgggatcgtggccctc
tggtctctggccgttctgtcctttgagcgcttctttgtcatctgccggcctttagggaac
attcggctgcagtcgaagcatgccgtcctggggctgctgttcgtttggaccttctctttc
atctggaccttccctccagtgctgggctggaacagatacaccgtgagcaagatcggaacc
acctgtgagcccgactggtactccaccaacatgacagatcacagctacatcatcaccttc
ttcgccacctgcttcatcttgccgctcggagtgattttcttctgctacgggaagctgctg
aggaagctccgaaaggtgtctcacggccgcctggccagtgccaagaagcccgagcggcag
gtgacccgtatggtggtggtgatgattgtggccttcatggtgggctggacgccctacgca
gccttctccattctggtcacggctcatccaaccgtccaactggacccccggctggctgcc
attcccgccttcttctccaagacggccgcggtctacaacccgatcatttacgtcttcatg
aacaagcagttcagaaagtgtctgatccagcactttaccggagtggggatcatcccggac
agcaacctgaaccagacctcagagcggcccggaatcacagccgagacccacacgggagaa
atgtcagccatcgcagcccggatccccgtgagcgtcgccgcggcgtccagatctgaggat
tctcaaaccgacggcggccagttccttcagcttcccatcccggagaacaaagtgtgtccg
ctgtag
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