Kryptolebias marmoratus (mangrove rivulus): 108250749
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Entry
108250749 CDS
T05608
Symbol
itsn1
Name
(RefSeq) intersectin-1 isoform X1
KO
K20045
intersectin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108250749 (itsn1)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108250749 (itsn1)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
108250749 (itsn1)
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108250749 (itsn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_13
SH3_9
SH3_1
SH3_2
RhoGEF
INTAP
EF-hand_4
C2
EF-hand_1
EF-hand_6
EF-hand_7
PH
EF-hand_5
PH_16
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
108250749
NCBI-ProteinID:
XP_037829314
LinkDB
All DBs
Position
LG22:complement(2605317..2673939)
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AA seq
1764 aa
AA seq
DB search
MAQFPTTFTGPDVFQISVDERAKHDQQFHSLSPTAGGYITGDQARNFFLQSGLPPPILAQ
IWALADMNGDGRMDIHEFSIAMKLIKLKLQGHPLPPALPPSMKQPPLPLPPQTGFGMPPM
APIPTPIPAPLPGVPPLPLPPVPVGVSPPLVSSAPPPLPQPIANGAPPTAIMPPIPGFPH
PAPPVNKLSSFNRSSTKLQKGSSFDAAGAQPPSDWAVPQSSRLKYRQLFNSHDKMMSGYL
TGPQARTILMQSSLPQSELATIWSLSDIDQDGKLTAEEFILAMHLIDMAMSGLPLPPVLP
PDYLPPTFRRVRSDSVQSDQKSVQEEMEEEAESSEEKKLPVTFEDKKRENFERGNLELEK
RRQALQEQQRKEQERLAALEREELERKERERLEQERRRQQELEKQLERQRELERQREEER
RKEIERREAAKRELERQRQLEWERQRRQELLTQRNREQESIVLLKARKKTLEFELEALND
KKNQLEGKLKDVRFRLSAQRREMEQTNQTRETRIAEITQLQQQLQESQQWLGRLIPDKQN
LNDQLKQVQQSSLHRDSLSSLQKAVEQKESSRQQLREQLDAVERETRAKLLEIDAFNTQL
KELREIHSRQQRQKQKQLEGDTHTQTHMLSHMQTLSDRKSAELQESGLSSNEPGPSTTKA
PSPASVSASHAWLNRVTQEEEERRRRGMEEEEEGRKGARSIEEKEDESRGKKDMQEKLNK
LFSQPADPWVSAVEKAPCPGLFDQKASSSGFDQQQQQQQQPVKVVYYRALYPFDARSHDE
ISIQPGDVIMVRRMHPDSVDESQTGEPGWLGGELRGRTGWFPANYAERIPDSEAPISLRS
TSSATPPSAQQPIATPPPAPGHSSTSTSSANSNWADFSTTWPSNTTSQSDSEGWDAWPTS
SANQNPSLSVPSAQLRQRSAFTPATMTTGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNH
LNFNKNEIITVLEQQDMWWLGELQNGQRGWFPKSYVKLISANVTGPAGAVTRTKNTSESG
LSESPPNGKRPTSSPTKPSEPGEEYVAMYTYESTEQGDLSFQQGDIVVVTRKEGDWWTGM
VGGKTGVFPSNYVKPRDSSSESLGPAGKTGSLGKKPEIAQVIAAYTATGAEQLTLAPGQL
ILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPSTSKTTPTEPTPLKLTPASTGL
CQVIGMYDYLAQNDDELAFQKGQVITVLNKDDCDWWKGELNGREGLFPSNYVKLTTDTDP
STQWCADLHLLDMLSPMERKRQGYIHELIVTEENYVNDLQLVTEIFHKPLLDCELLTEKE
VAMIFVNWKELIMCNIKLLKALRVRKKMSGDRMPVKMIGDILTNQLPHMQPYIRFCSCQL
NGATLIQQKTDDNPEIKDFLKRLAMDPRCKGMPLSSFLLKPMQRVTRYPLIIKNILENTP
ESHPDHSHLKAALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNC
LGPRKFLHSGKLFKAKSSKELYGFLFNDFLLLTQVTKPLGSSGSDKVFSSKTHLQYRMYK
TPIFLNEVLVKLPTDPSGDEPLFHISHIDRVYTLRAESINERTAWVQKIKAASELFIETE
KKKREKAYLVRSQRATGIGRLMVNIVEGIELKPCRSHGKSNPYCEVTMGSQCHITKTVQD
TLNPKWNSNCQFFIKDLEQDVLCITVFERDQFSPDDFLGRTEIRLAEIKKDQGSKGPITK
RLLLHEVPTGEIVVRLDLQLFEEP
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggcacagttccccaccacattcacaggtccagatgtgtttcagatttccgtggatgag
agagccaaacatgatcagcagtttcacagcctctctccgactgctgggggttacataaca
ggtgaccaggccagaaactttttccttcaatcaggcctgcccccgcccattcttgcccaa
atctgggctctggctgatatgaacggtgatggccgtatggatatccacgagttctccatc
gccatgaaactcatcaaactcaaactccagggtcaccctctgcccccagcgctccccccc
agcatgaaacaacctccgctacctttacccccacagactggctttggcatgccccccatg
gctcccatccctactccaatcccagctcctctgccgggcgtgcctccgctccccctgcct
cctgttcctgtcggggtgtccccccctctcgtctcatctgcaccacctccccttccgcag
cccattgccaacggagctcctcccacagccataatgccacccatcccaggcttcccccac
ccagctcctcctgtgaacaaactgtcttcgtttaatcgttccagcaccaagctacagaaa
ggctcatcatttgatgctgctggggctcaacccccctcagactgggcagttcctcagtcc
tccaggttgaagtacagacagctttttaactcccacgacaagatgatgagtggatacctc
actggaccccaggcacgcactatcctgatgcagtccagtcttcctcagagtgagctggcc
acgatatggagtttatcagacatcgaccaggatggaaagctaacagctgaggagtttatc
ttggctatgcacctcatagatatggctatgtcagggttaccgctgcctccagtgttacca
ccagactacctcccaccaacgttcaggcgtgttcgaagcgacagtgttcagtcagaccag
aagagtgtccaggaggagatggaggaggaggctgagagcagcgaggagaagaaattacca
gtgacttttgaggataagaagagggaaaactttgagcgaggaaacctggagttggagaaa
agacgccaggctcttcaggagcagcagagaaaagagcaggagaggctggctgcactggaa
agagaagaactggagagaaaggagcgtgagcgtctggagcaggaaagaaggcgacagcag
gaacttgagaaacagctggagagacagagagagctggagaggcaaagagaagaggagagg
cgcaaagagatagaaaggagagaggctgctaagagggaattagagcgccagcgtcaactg
gagtgggagaggcagcgtcgccaggagcttctgactcaaagaaacagagagcaagaaagt
atagtcctgctcaaagccagaaagaaaaccctggagtttgaactggaagctttgaatgac
aagaagaaccagttggagggcaaactgaaggatgttcgttttcgtttgtcagctcagcgc
agagagatggagcagaccaatcagaccagagaaacacgcatagctgaaatcacacagcta
cagcaacagctacaggagtcccaacagtggctggggaggctgattcctgacaaacagaat
ctgaatgaccagttaaaacaggttcagcaaagcagtctgcaccgcgacagtctgtcttcg
ctgcagaaggccgttgagcagaaagagagcagcaggcagcaactcagagagcagctcgat
gctgtggagcgagaaacaagagcaaaactgctggaaatagatgccttcaacacacaactg
aaggagctgcgagagatccacagccggcagcagagacagaagcagaagcagctggaggga
gacacacacacacagacacacatgctctctcacatgcaaacgctgagcgatagaaagtct
gctgagctgcaggagagcggcttgtcgtcaaatgaaccaggaccctccacaactaaagcc
cccagccccgcctctgtttctgcgtcgcacgcctggctgaacagagtgacacaggaggag
gaggagaggaggaggagagggatggaggaagaggaggagggcagaaagggagctaggtct
atagaagagaaggaggatgagagccgaggcaaaaaggacatgcaggaaaaactgaacaag
ttgttcagtcagccagctgacccctgggtttcagcagtggagaaggctccgtgtcccggt
ctgtttgaccagaaagcatcaagcagtggcttcgatcagcagcagcagcagcagcagcag
ccagtgaaggtggtctactacagggctctgtatccgttcgatgctcgtagtcacgatgag
atcagtatccaacctggagatgtaatcatggtgcgtagaatgcatccagactcagttgat
gagtcccaaacaggtgagcctgggtggctcggcggggagctcagaggcaggactggttgg
tttccagccaactatgcagagaggatacctgacagcgaagcgccaatcagcctacgctcc
acgtcctcagccacacccccttcagcccagcagcccatagccacaccccctccagctcct
gggcacagctccacctccacatcatctgccaatagtaactgggctgacttcagcaccaca
tggccctccaacacaaccagccagtcagacagtgagggatgggacgcatggccgacctcc
tcagccaatcagaatccttctctaagtgttccgtccgcacagctacggcagcgctctgcc
ttcacaccagctactatgacaacaggctcctccccctctcctgtactgggacagggagaa
aaggtcgaaggtcttcaggctcaggctttgtatccctggagagccaagaaggacaaccac
ctcaactttaacaaaaacgagataataacagtgttggagcagcaggacatgtggtggttg
ggtgaacttcagaacggacagagaggctggttccccaaaagttacgtcaagctcatctca
gccaatgtgacgggccctgctggtgctgtaacacgcaccaaaaacaccagtgagtctgga
ttatcagaaagcccccccaacggaaaacgaccaacatcttctccaacaaaaccctccgag
cctggagaagaatatgttgccatgtacacctatgagagcactgaacagggggacctgagt
ttccagcaaggagacatcgttgtggtgaccaggaaagagggggactggtggacaggcatg
gttgggggaaagactggagtctttccatccaactacgtgaagccacgtgattcatcgtca
gagtcactgggaccagcagggaaaacaggcagtctggggaagaaaccagagattgctcag
gtgatcgctgcctacacagcgacaggagcagagcagctgacattagctccaggacagctt
atcctcatcaggaaaaagaacccaggaggctggtgggagggagagctccaggctcgagga
aaaaagcgtcagattggttggtttccagccaattacgtaaagctgctgagtccgagcacc
agcaagacaacacccacagagcccacccctcttaaactgactcctgccagcacaggtctg
tgtcaggtgatcggcatgtacgactacttggctcagaacgatgacgagctggccttccag
aagggtcaggtgatcacggtgctcaacaaggatgactgtgattggtggaaaggagagctg
aacgggagggagggtctgtttcccagcaactatgtcaaactgaccacagatactgacccg
agcactcagtggtgcgccgacctccacctgctggacatgctgagtccgatggagaggaag
aggcagggctacatccacgagctgattgtcaccgaggagaactacgtcaacgatctgcag
ctcgtcaccgagatcttccacaagcctctgctagactgtgagctgctgacggagaaggaa
gtggccatgatctttgtgaactggaaggagctcatcatgtgcaacatcaagctgctcaag
gctctcagggtcaggaagaagatgtcgggcgatcggatgccggtgaagatgatcggcgac
atcctgaccaaccagctgccccacatgcagccgtacatcaggttctgctcctgtcagctg
aacggagccacgctgattcaacagaagactgacgacaaccccgagatcaaagacttcctc
aagaggctggccatggaccccaggtgtaaaggaatgcccctgtccagttttctcctcaaa
cccatgcagagagtcacacgctaccccctcatcatcaaaaatatcttagaaaacactccg
gagtctcaccctgatcacagccacctgaaagctgccctggagaaagcagaggagctgtgc
tcacaggtgaacgagggcgtcagggagaaggagaactcggatcgcctggagtggatccag
gctcatgttcagtgtgagggactctcagagcaactggtgtttaactcagtcaccaactgt
ctgggcccgaggaagttcctgcacagcgggaagctgtttaaagcaaagagcagcaaagag
ctctacggcttcctgttcaacgacttcctgctgctgacacaggtcaccaaacctctgggt
tcttcaggttcagacaaagtcttctcctcaaaaacccacctacagtatcgcatgtacaaa
acgccgatcttcctgaacgaagtgttggtgaagctgccgacagacccctcaggagatgag
cctctgttccacatctctcacatcgacagagtttacaccctcagagccgaaagcatcaat
gaaaggactgcgtgggttcagaaaatcaaggccgcctcggagctcttcattgagacggag
aagaagaagagggagaaggcgtatttagtgcgctctcagagggccacaggaatcggtcga
ctgatggtcaacattgtggaggggatcgagctcaaaccctgtcgctcccatggaaaaagt
aacccatactgtgaagtgaccatgggttctcagtgccatatcactaaaacggtacaggac
acgttgaatcctaagtggaattccaattgtcagttttttattaaggaccttgaacaggac
gtcctctgtatcactgtgtttgaacgagaccagttctcgcctgacgacttcctcggtagg
actgagatccggttggctgaaataaaaaaggaccagggctctaaaggaccaatcacaaag
aggctgctgctccacgaggttcccacaggggagatcgtggtcagactggacctgcagctg
tttgaggagccgtga
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integrated database retrieval system
