Kryptolebias marmoratus (mangrove rivulus): 108251108
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Entry
108251108 CDS
T05608
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108251108 (zfr)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108251108 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
108251108
NCBI-ProteinID:
XP_037832759
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All DBs
Position
LG1:4282284..4311918
Genome browser
AA seq
1072 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAAAVAVARPAPVAVAAATAAAYGGYQTTHAATDYGYPQRQPEV
PPPPPPVTSQNYQDSYSYVRSTATAVAYDSKQYYQQPTATAAVAAAHPQPSVADSYYQTA
PKPGYSQGVTSYTQTQQTRQVTMIKPAAPSPASSTFSIFPVTSTVQPVAAAASVVPSYSQ
SPTYSTNAVTYSGTSYSGYEAAVYSAASNYYQQQQQQQKQAVAAVAATAAWSGNTFTKKP
TFQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSTSSG
GSGGVLARSAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMS
TQTLSSNTTAPSKATAATLSSSSTTSSLSATSSTTTSPSAPYLKPVNIVSSSATAFKTQG
GSSLSAASSISAGKKVNTPKINFVGGNKLQTTGKLEEMRSEVKVDSCKPATPSGSQDTKT
DISDSLSTSALVSLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDERRRMPDGGYPQGPPGPPGLLGVRPGMPGLQPQGPMPPRRPDSS
DDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQEAVKEEDKEKKEPAKDR
VLKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLLTSIMEHLPKQLTIVTPEKYEVK
ALLQEAAIILTSCSEPKMQVTITLTSPVLRDEVGREGDVTSGMVKDPADVLDRQKCLDAL
AALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSASAPLS
PGDALRRVFECISSGILLTGGPGLLDPCEKKPVDTLTAMGEQQREDITSSAQFVLRLLAF
RQIHKVLGMDPLPQMNPRFSVRNSRKRRRDNSDGTDSFEGEGKKDKKDYDSF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgcccagttgtctccttcacctatgtgcccagccggctcggtgaagat
gccaaaatggctaccggcaactattttggatttactcatggagctgctgctcagtacagc
cagcagccagcagcgggggtagcatacacccaccccaccacagtggccagttacacagtc
caccaggcgcctgtggcagcacacaccgttgcagcagcctacgcacccactgctgctgcc
gttgccgtggcgagacctgcgcccgttgctgttgcagcagcgactgcagcagcctatgga
gggtatcagacaacacatgctgccactgattatggctacccacagcgtcagccggaggtt
cccccaccaccacctccggtcacctcacagaactatcaggactcttactcgtatgttcgg
tccacagctacagctgtagcttatgacagtaagcagtactaccagcagcccactgctaca
gctgctgtagctgctgcacatccacagcccagcgtggcagactcctactaccagacagcc
cccaaacctggatacagtcagggagtgacatcatacacccaaacccagcagactcggcag
gtgacgatgataaaaccagctgctcccagtccagcttcatccacgttctccatcttccca
gtgacctccacggtccagcccgtcgccgctgcagcctctgttgtcccatcttactcccaa
agcccaacatacagcacaaatgctgtcacctactctggaacctcatactctggttatgaa
gcagctgtgtactctgcagcttctaactactaccagcagcagcagcagcagcagaaacaa
gcagtggcagctgtggcagcaacagcagcctggtctggaaacactttcaccaagaaaccc
accttccagagcaaacagcttcgacccaaacagcctccgaaaccccctcagatacactac
tgtgatgtgtgcaagatcagctgtgctggcccgcagacttataaggagcacctggagggc
cagaagcacaagaagaaggaggcagccctgaaggtttctcagagcagcaccagcagtggt
ggaagtggaggggtgttggcccgcagcgctcagaaccagctccgctgtgaactctgtgac
gtttcctgtaccggcgccgatgcatatgctgctcatatccgaggagccaagcaccaaaag
gttgtaaagcttcacaccaaactgggaaagcccattccttcgactgagcccagcatgtcc
actcagacactgtcctccaacacgactgctcccagtaaggccactgcagccactctgagc
agttccagcaccaccagctccctgtcggccacctcctccaccaccaccagccccagcgcc
ccctatctgaaacccgtcaacatcgtcagcagcagcgccactgctttcaagacccagggg
ggcagcagcctgtcagctgccagctccatctcagccgggaagaaagtcaacacccccaaa
attaactttgttggtggaaataaattgcagaccacagggaagctggaagagatgaggtca
gaggtcaaagtggacagctgtaagcctgcaactccttcaggctctcaggacaccaagacg
gatatttctgattctctgtccacatcagccctggtgtctctgcagagcgacgttcagcct
gttgggcatgactatgtggaagaagtccggaacgatgaaggcaaagtcattcgctttcat
tgtaagctgtgtgagtgtagtttcaatgatccgaatgcaaaggagatgcatctgaaaggc
cggagacaccgcctgcagtacaagaagaaagtgaaccctgatctgcaggtagaggtcaag
cccagcatccgagccagaaagattcaggaagagaagatgagaaaacaaatgcaaaaagaa
gagtactggagaagaagagaagaggaggaacgctggagaatggagatgaggcgttatgaa
gaggacatgtactggagacgtatggaggaggagcagcatcactgggatgagcggcgccgt
atgccggatggaggctatccgcagggccctcctggtcctcctggtcttcttggtgttcga
cctggtatgcctggtctgcagccacagggtcccatgcctccacgtcgtcctgactcttct
gatgaccgctacgttatgaccaagcacgctgccatctacccgtcagaagatgagctccag
tccattcagaaaatcgtttccatcacagaacgagccctcaaactggtgtctgacatcatt
acagaccaggaagctgtgaaggaagaggacaaagagaagaaggaaccggctaaggacaga
gtcctgaagggggtgatgagggttggagttctggccaaaggcttgctccttcgtggagac
aagaacgtcaacctggtcctgctgtgctctgagaagcccacaaagagcctcctcacgagc
atcatggagcacctcccaaaacagctcacaatagtgacaccagaaaaatatgaagtgaag
gccttgttgcaggaagcggccatcattctgacatcttgcagcgagccgaagatgcaagtg
acgatcacgttgacttcacccgtgcttagagatgaagtgggccgagaaggagatgtaacc
tcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctgcgccacgctaagtggttccaggctagggccaatggtcttcagtcctgtgtg
atcatcatccggatcctgagagacctttgccaacgagtccctacatggtcacctttcccc
ggatgggctatggagctgctggttgagaaggccattagtagtgcctctgcccccctcagc
cccggggacgctctgagacgcgtctttgaatgtatttcttctgggattttactcactggt
ggaccaggcctgttggatccttgtgagaagaagcctgtggacaccctcacagccatggga
gagcaacagagagaggacattacctccagtgctcagttcgttctgaggctgctggccttt
cgtcagatccataaagtcctgggaatggaccctctgcctcagatgaacccgcgcttcagc
gtccggaacagccggaagcggcgccgggacaacagcgacgggacggacagtttcgagggc
gaaggcaaaaaggacaaaaaggattacgacagtttttaa
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integrated database retrieval system
