Klebsiella oxytoca CAV1374: AB185_23730
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Entry
AB185_23730 CDS
T04534
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
koc
Klebsiella oxytoca CAV1374
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koc03016
]
AB185_23730
Enzymes [BR:
koc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AB185_23730
Transfer RNA biogenesis [BR:
koc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AB185_23730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
OSR1_C
ODP
Motif
Other DBs
NCBI-ProteinID:
AKL36722
LinkDB
All DBs
Position
3907826..3909760
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI
IAVVNTEKERESAEPEELVEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQYITYGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERRDLTALAFVTIDSASTEDMDDALYVEQTADGKLHLTVAIADPTAWIAEGSK
LDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMILADDGTIEDDIQF
FAATIESKAKLAYDDVSDWLENNGGWQPGSETIAQQIKLLQEACLRRSEWRKNHALVFKD
RPDYRFVLGDKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPVEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEAISRPQDDVAIQMAERRRLNRM
AERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagactccg
cgcgttgaaggggtcgttaaggggacggaaaaaggatttggcttcctcgaagtcgactcg
cagaaaagctatttcattccgccgccgcaaatgaaaaaagtgatgcatggcgatcgtatt
atcgccgtggtcaatactgaaaaggaacgcgaaagcgctgagcctgaagaactggttgag
ccgttcctgacgcgttttgtcggcaaagttcataagaaagacgatcgtctttccatcgtt
cctgaccatccgctgctgaaagatgccattccttgccgcgccgcgcgcggcgtagagcat
gattttaaagagggtgactgggccgttgccgaaatgcgccgtcatccgctgaaaggcgac
cgcggtttctacgctgagctcacccagtacattacctacggcgacgatcatttcgttcca
tggtgggtcaccctggcgcgtcataatctggaaaaagaagcgccggacggcgtggcgacc
gagatgcttgatgaaggtctggaacgccgtgatttaacggccctggctttcgtgaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtacgttgagcaaaccgctgacggc
aagctgcatctgaccgtcgctatcgccgatccgaccgcgtggattgccgaaggcagcaag
ctggacaacacggcgaaaattcgcgcctttaccaactatctgccgggcttcaacattccg
atgctgccgcgcgagctctcggacgacctctgctctctgcgccccaacgaggttcgcccg
gttctggcctgccgcatgatcctcgcggatgacggcaccatcgaagatgatattcagttc
ttcgcggcgaccatcgagtcgaaagcgaagctggcctacgatgatgtttccgactggctg
gaaaataacggtggctggcagccgggaagcgagactatcgcccagcaaattaagctgctg
caggaggcctgcctgcgtcgtagcgaatggcgtaaaaaccacgcgctggtattcaaggac
cgcccggattaccgctttgtgcttggcgacaagggcgaagtgctggatatcgtcgccgaa
ccgcgtcgtatcgccaaccgcatcgttgaagagtcaatgattgccgccaacatctgtgcc
gcccgcgtgctgcgcgacaaactcggtttcggcgtttataacgtccacaccggtttcgat
ccggccaacaccgagcagctcgcggccttactgaagactcacgatgtgcacgttgacccg
gtggaagtgctgacgctggaaggcttctgcaagctgcgtcgcgagctggacgcgcagccg
tctggtttcctcgatagccgtattcgtcgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcacttcggcctgggtcttgaggcctatgcgacctggacttccccgatccgt
aagtacggcgatatgattaaccatcgtctgctgaaagcaattatcaaaggggaagcgatc
tcccgtccgcaggatgacgttgcgatccaaatggctgaacgccgtcgcctcaaccgcatg
gcggagcgcgatgttggagactggctgtacgcccgctatctgaatccgcaggccggcacc
actacccggtttgcagctgagattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gttgataacggcgcggttgcctttatcccggcgccgttccttcacgccgtgcgcgatgaa
ctggtgtgcagccaggaaaacggcaccgtgcagatcaaaggcgaagtcgtctacaaagtc
acggatgttatcgacgtcacgattgccgaagtgcgcatggaaacccgtagcgtgattgcg
cgtccagccgcctga
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