KEGG   Kibdelosporangium phytohabitans: AOZ06_37985Help
Entry
AOZ06_37985       CDS       T04088                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kphy  Kibdelosporangium phytohabitans
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kphy00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AOZ06_37985
Enzymes [BR:kphy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AOZ06_37985
DNA repair and recombination proteins [BR:kphy03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AOZ06_37985
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
8406999..8407877
Genome map
AA seq 292 aa AA seqDB search
MAERQLRLSNLEKPLYPDGFTKAQVIGYYSQLAPLLLPLLAGRPVTFVRYPDGTDGEGFY
EKNAAAGAPAWLRTVSLTGSGSRGSGGPVNYPLIDDLPSLVWAANLAALELHVPQWTVTS
DGARGIPDRLVFDLDPGEGATVVDCAAVATRIRDALVHDGLTPYATTSGSKGMQLYAGVP
GGPRSTSAYAKALAERLARESPDRVTAKMTKALRAGKVFIDWSQNNPAKTTISPYSLRGR
ATPTVATPVTWDEVGACRREDELVFTAGDVAARVERFGDILAGLSQSGAGSP
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
gtggccgagcggcagctgcggctgtccaatttggagaagccgctctacccggacgggttc
accaaggcccaggtgatcggttactacagccagctcgccccgctgctgctgccgttgctg
gccggtcggcccgtcacgttcgtgcgctaccccgacggcaccgacggcgaggggttctac
gagaagaacgccgccgcgggtgcgccggcctggctgcggaccgtgtcgttgaccggcagc
ggttcgcgtggcagcggcggccccgtcaactacccgctcatcgacgacctgccgtcattg
gtgtgggcggccaacctcgccgcgctggagcttcacgtaccacagtggacggtcacatcg
gacggtgcgcgcggcatacccgatcggctggttttcgacctcgaccccggtgagggtgcc
acagtcgtcgactgcgccgctgtggccacccgcatccgcgacgcccttgtccacgatgga
ctcacaccgtacgccaccacgtccggctccaagggaatgcagctctacgcgggcgttccg
ggtggtccacgctccacttccgcctacgcgaaggcgctcgccgaacgcctcgcgcgggaa
tctcccgatcgggtgaccgcgaagatgaccaaggcgttgcgggccggcaaggtgttcatc
gactggagccagaacaacccggcgaagacgaccatctcgccgtattccctgcgcggccgg
gcgacaccgaccgtggcgaccccggtgacctgggacgaagtcggcgcgtgccggcgtgaa
gacgagctcgtgttcaccgccggagacgtcgccgcgcgcgtcgaacggttcggggatatc
ctcgctgggctgtcgcagtccggggccggatcgccctga

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