Kosakonia radicincitans: A3780_02725
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Entry
A3780_02725 CDS
T04579
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00470
D-Amino acid metabolism
krd00550
Peptidoglycan biosynthesis
krd01100
Metabolic pathways
krd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A3780_02725 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A3780_02725 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
A3780_02725 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
krd01011
]
A3780_02725 (ddl)
Enzymes [BR:
krd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
A3780_02725 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
krd01011
]
Precursor biosynthesis
Amino acid ligase
A3780_02725 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
ATPgrasp_YheCD
TTL
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
APG16527
LinkDB
All DBs
Position
594921..595841
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AA seq
306 aa
AA seq
DB search
MAEKVAVLLGGTSAEREVSLNSGAAVLVGLREGGVDAHGVDPRDVDVTRLKEMGFSKAFI
ALHGRGGEDGTLQGLLELIDMPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALERS
EFESGLSFDDIQRIDELGLPVIVKPSREGSSVGMSKVEKSEDLHAALALAFQHDDEVLIE
KWLSGPEFTVALLGNEILPSIRIQPAGIFYDYEAKYLSDETKYFCPSGLEVEREAALQSL
VLKAWRLLGCRGWGRIDAMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGLSFSQLVVR
ILDLAE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagaaagtagcggttctgctgggcggaacctccgccgagcgtgaagtttcgctt
aattccggtgcagcggtgctggtggggttgcgggaaggcggagtggatgcgcacggcgtg
gatccgcgtgatgtggatgtcacccgcctgaaagagatgggttttagcaaagcatttatt
gctttgcatggtcgcggcggcgaagacggcaccttgcaggggctgcttgaactgatcgat
atgccttataccggcagcggcgttatggcatccgcgatctccatggataaactgcgcagc
aaattgttgtggcagggcgccggattaccggttgcaccatgggtcgcgctcgaacgcagt
gagtttgaatcaggcctaagttttgacgatattcaacgcattgatgaactggggttacct
gttattgtcaagcccagtcgtgaaggctccagcgttgggatgtcgaaggtagagaaaagt
gaagatctgcatgcggcgttagcgcttgcgtttcaacatgatgatgaagttctgatcgaa
aaatggctaagtggcccggaatttaccgtggcgctgcttgggaacgaaattttaccgtct
attcgtatccagccagcgggaatcttctatgattatgaggcgaagtatctctctgatgag
acaaaatatttctgcccttcaggtctggaagtggagcgagaggcggcattacagtccctg
gtattgaaagcatggcgtcttttaggttgccgtggctggggacgaattgatgccatgctg
gatagcgacggtcagttttatttgttggaagcgaatacatcgccagggatgacgagccac
agcctggtgccgatggctgcgcgccaggcgggtttgagcttctcacaacttgttgttcgc
attctggatctggcggagtga
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