Kosakonia radicincitans: A3780_12960
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Entry
A3780_12960 CDS
T04579
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
krd
Kosakonia radicincitans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MalT
GerE
AAA_16
AAA_22
Sigma70_r4_2
HTH_24
NB-ARC
Sigma70_r4
HTH_20
HTH_23
TPR_12
HTH_7
HTH_40
HTH_38
AAA_14
AAA_25
AAA_30
HTH_28
DnaB_C
TPR_4
TPR_19
NACHT
HTH_5
HTH_29
DUF2089
HTH_36
AAA_19
TPR_14
DUF2786
Motif
Other DBs
NCBI-ProteinID:
APG18422
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Position
2833018..2835726
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AA seq
902 aa
AA seq
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MAFLSSIRDVPAVQTHDEPFRFARALPLILTKLTPPRSPGALVHRDRLLQQLDGAASRNL
TLVCAAAGFGKTTLLAQWYHHRQQQGDSIAWLSLEEDDNSPLLFMRYLQEALRPLSQQEK
NPSSALSSGELAGDFALFCATLINLLHTHPRPLYLILDDYQNIQHPEIHAGISWLLAHAP
ACLHLVLGSRSPPPWALSRLQIEDQLLEIDDDALRFTHDEAHSWFSATTAAPVKKEMLHR
LISVTEGWIAGMKMAALAPHGRTDNEGSLRASSRSVSRYLDEVVFAPLPADVFDFLLRTS
LLNRLHPALCDAVTGLHNGEEMLAWIAGRNLFLSTLDDEGFWFRYHPLMRDALLTRLQRH
GQEAVSLLHERASTWFAAQQLWAEAIRHTLAAGKPMTSHAVAGAQSLAEEGDIDTMVRWM
RYLPADVTPARIELQINLAWALAHYFRFDDARQLLDELDDLAAKNPELARPARIKLRVVR
AICEAFAENIAASLAIVEPLLQAVPCGDIWVDGLVCNILSYGYLVASRPQQALAVHQRIA
IAQAPLRNLFVEVYRAFVMAQACLRQGDLTQAEQLASRALSHAEQHTGANSSSSATLAPV
LAEIAWEQGSDERIEALLTLRLQTIDDVCPPDGLSSCYRVLAHQAQQNNQPHEAQALLQH
AEQLAERRGWLRIRAFLLAERLALYLLAGHHDAAESALAQLLQIRAADPHQQTLIDRYCA
ISQCRMQMARGEPLIAARLLHTQVDALEECGEWLSAVRLRLLEAIALFRGGEIAQAATVG
LPALQSAVGKNLRRSLQDLGPDLALWLAHLNKQPARDVVIHTLLSQLSAMLPASATASLR
LTEREQQTLCLIADGHSNKQIARSLGISVETVKWHLKQLYEKLQVKGRIQAVNQARKQQL
LR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttttatcctcaatcagggatgtacccgcagtgcagacgcacgatgaaccgttc
cgtttcgcccgcgcgttaccgctgatcctcaccaagctcacgccgccgcgctcgccgggc
gcgttagtacaccgtgaccggctgttacagcagcttgacggcgccgcatcccgtaacctg
acgctggtgtgcgccgccgccgggtttggcaaaacgacgctgctggcgcagtggtatcat
caccgccaacaacagggcgacagcatcgcctggctgagccttgaagaggatgacaactcg
ccgctgctgtttatgcgttacttgcaggaggcgttacgcccgctcagccagcaggaaaaa
aatccatcatcggcattgtccagcggcgaacttgcgggtgattttgctctcttctgcgcc
acgctgattaacctgttgcacacgcacccgcgcccgctgtacctcattcttgatgattac
cagaatattcaacacccggagatccatgccgggataagctggctgttggcgcatgcgccc
gcctgcctgcatctggttttaggcagccggagtccgccgccatgggcgctcagccgcctg
caaatcgaggatcaactgctggagatcgatgatgacgcgctgcgcttcactcacgatgaa
gcccacagctggttttccgcgaccaccgcggcaccggtaaaaaaagagatgcttcaccgg
ttaatttcggtcactgaaggctggattgcgggcatgaaaatggccgcccttgccccgcac
ggtcgcaccgataacgaggggagcctgcgggccagttcccgatcggtttcgcgctatctg
gatgaggtcgtcttcgccccgctaccggctgatgtgtttgattttctactgcgaacgtcc
ctgctcaatcgtctccatccggcattgtgcgatgccgtaaccggtctgcataacggcgag
gagatgctcgcctggatagccgggcgcaacctgtttctctccacgctcgacgacgaagga
ttctggtttcgttaccacccgctgatgcgcgatgcattattaacgcgtttacagcgtcat
gggcaggaagccgtgagtttgctgcatgaacgagccagcacctggtttgccgcccaacag
ctgtgggctgaagccatccgccatacgctcgccgccggtaaaccgatgaccagccatgcc
gttgccggggcgcaatcgctggctgaagagggcgatatcgataccatggtgcgctggatg
cgctatctgcctgcggacgtgacgcccgcgcgtatcgaactgcaaatcaacctcgcatgg
gcgctggcgcactatttccggtttgacgatgcgcgtcaactgctggatgagctcgacgat
ctggcggcaaaaaacccggagctggcccgccctgcccgcatcaaactacgcgtggtgcgg
gcgatttgcgaagccttcgccgaaaatattgctgccagtctcgccattgtggagccgctg
ttgcaggcggtgccctgcggcgatatctgggtagatggcctggtgtgcaatattctcagc
tacggctaccttgtcgcctcacgcccgcagcaggcgctggctgttcatcagcgtatcgcc
attgcgcaagcgccgctgcgcaacctgtttgtggaggtttatcgtgctttcgtgatggcg
caagcctgcctgcgccagggggatttaacacaggctgaacagctggcttcccgcgcgctg
agtcatgcggaacagcataccggcgcaaattccagcagcagcgcaacgctggcaccggtg
ctggcagaaatcgcctgggaacagggaagcgatgagcgtatcgaagcgctgttgaccctg
cggctgcaaaccattgatgacgtctgcccgccggacggtctgagcagttgctaccgtgta
ctggcacatcaagcgcagcaaaacaatcagccccacgaagcgcaggcgctgttacagcat
gctgaacagctggctgagcgacgcggctggttgcgcatccgcgcttttttgctcgctgag
cggctggcgctttacctgctggcgggtcatcacgatgccgccgaaagtgcgctggcgcag
ttgctgcagattcgcgcggcggatcctcatcaacaaacacttatcgacaggtactgcgcc
atcagccagtgccggatgcagatggcgcgcggcgaaccgctgatagcagcaaggttactg
cacacgcaggtagatgcgcttgaggagtgcggcgaatggcttagcgctgtgcgcttgcgc
ttgctggaagccattgccctgttccgcggcggagaaatcgcgcaggcggctacggtgggc
ttaccggcactgcaaagcgcggtggggaaaaatctgcgtcgcagcctgcaagacctcggc
ccggatcttgcgctgtggctggctcacttgaataagcagcccgcgcgggatgttgtcatc
catacgctgcttagccagttgagcgcgatgctgcccgcctccgcaaccgcaagcctgcgg
ttaacggagcgcgaacagcaaacgttgtgcttaattgccgacggccattccaacaaacag
atcgcccgctcgctggggatttctgtggaaaccgtcaaatggcacctgaaacaactgtat
gaaaagttgcaggtgaaggggcgcattcaggcggtcaatcaggcgcgtaaacaacaactg
ttacgctga
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