Kosakonia radicincitans: A3780_16600
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Entry
A3780_16600 CDS
T04579
Symbol
dppD
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
krd
Kosakonia radicincitans
Pathway
krd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3780_16600 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
krd02000
]
A3780_16600 (dppD)
Transporters [BR:
krd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A3780_16600 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
AAA_29
SMC_N
FtsK_SpoIIIE
nSTAND1
NACHT
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
APG19105
LinkDB
All DBs
Position
complement(3633723..3634733)
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AA seq
336 aa
AA seq
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MSHEAFVHIHDLRVEFRRDGQTVNAVNGVSFDVRKGEVMALIGESGSGKSVTLRALMRLH
PPQSSRLSGTMNVGGAAVLAMNSRQLRHYRGKICAMIFQEPLLAFDPVYTIGQQIVEGLQ
RHEGLARNDAKARALEALRQVRIPSPERRLEAYPHEMSGGMRQRAMIALALSCNPELLLA
DEPTTALDATVQIQILILLREQQKLRDLSIIFVTHDIGAAVEIADRVAVMYAGRIVEEAP
IADILAQPRHPYTRVLLGSRPKEGLKKGDVLHCIPGSPPDLAALPPGCAFAARCPHAQSA
CHQQQPVTEQVAERHVVSCHRWRELTTDITPQQAFA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgaagcgttcgtccatattcacgatcttcgcgtcgagtttcgccgcgacggg
cagaccgtcaatgcggtcaacggcgtttcgtttgatgtccgcaaaggcgaagtgatggcg
ctgattggcgaatccggctccggtaaaagcgtcaccctgcgggccttgatgcgcctgcat
ccgccgcagagcagccggcttagcggcacgatgaatgtcggcggtgcagcggtgctggcg
atgaacagccgccagttgcgccactatcgcgggaaaatctgcgcgatgattttccaggag
ccgctgctggcgtttgacccggtttacaccatcggccaacaaattgtggaaggtttgcag
cgtcacgaagggctggcgcgcaatgatgcgaaagcgcgggcgctggaggcgttgcgccag
gtgcgtattcccagcccggagcgtcgtcttgaggcctatccgcatgagatgtccggcggc
atgcgccagagggcgatgattgcgctggcgctctcctgcaacccggaactgctgctggcc
gatgaaccgaccaccgcgctggatgccaccgtgcagatccagatcctgatcctattgcgc
gagcagcaaaaactgcgcgatttgtcgattatcttcgtcacccacgacattggtgcggcg
gtggagatcgccgatcgggtggcagtgatgtacgccgggcgcatcgtggaagaagcgccg
attgccgatatcctcgcgcagccgcgccatccctacacccgcgtactgctcggcagccgc
ccgaaagaggggctgaaaaagggcgatgtgctgcactgcattcccggctcgccgccggat
ctggccgctctgccgccggggtgcgcctttgccgctcgttgtcctcacgcgcagtctgcc
tgtcaccagcaacaacccgttacggaacaggttgctgaacgccatgtggtcagttgccac
cgctggcgcgaactgacaaccgacatcacaccacagcaggcattcgcctga
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