Kosakonia radicincitans: A3780_17275
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Entry
A3780_17275 CDS
T04579
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00260
Glycine, serine and threonine metabolism
krd00460
Cyanoamino acid metabolism
krd00630
Glyoxylate and dicarboxylate metabolism
krd00670
One carbon pool by folate
krd00680
Methane metabolism
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01120
Microbial metabolism in diverse environments
krd01200
Carbon metabolism
krd01230
Biosynthesis of amino acids
krd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A3780_17275
09102 Energy metabolism
00680 Methane metabolism
A3780_17275
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A3780_17275
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A3780_17275
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A3780_17275
Enzymes [BR:
krd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A3780_17275
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
APG19231
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Position
complement(3782188..3783441)
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTSLLEPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDETGHIDYNDLNEQAQKHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKAYQQQVAKNAKAMVE
VFLSRGYKVVSGGTDNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDSINDEAVIERTKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaattgtggcaggctatggag
caagaaaaagtacgtcaggaagagcacattgaactaatcgcctccgaaaactacaccagc
ccgcgtgtgatgcaggctcagggttctcagctgacgaacaaatatgctgaaggctatcca
ggcaagcgctactacggcggttgcgaatatgtggatatcgttgagcaactggctatcgat
cgcgcaaaagagctgtttggcgccgattacgctaacgtgcagccgcactccggttcgcag
gcgaacttcgcggtttacacgtctctgctggagccgggcgacaccgtgctgggtatgaac
ctggcgcacggcggccacctgactcacggctctccggtgaacttctccggcaagctgtac
aacatcgtaccttacggcatcgatgaaactggccatatcgattacaacgatctgaatgaa
caagcgcagaagcacaaaccgaaaatgatcatcggcggcttctctgcttactccggcgtg
gttgactgggcgaaaatgcgtgaaattgccgacagcatcggcgcttacctgttcgtcgat
atggcgcacgttgctggcctggtcgccgcaggcgtttatccgaacccggttcctcatgca
cacgttgtgactaccaccacgcacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaaaggcggtagcgaagagctgtacaaaaaactgaactccgccgtcttccctggcggc
cagggcggcccgctgatgcacgtgatcgccggtaaagcggtggcgctgaaagaagcgatg
gagccagagttcaaagcctaccagcagcaggtcgcgaaaaacgccaaagcgatggttgaa
gtgttcctgagccgcggttacaaagtggtttccggcggtacggacaaccacctgttcctg
ctggatctggtagacaaaaacctgaccggtaaagaagcagacgctgcactgggtcgtgcg
aacatcaccgttaacaaaaacagcgtgccgaacgatccgaagagcccgttcgttacttcc
ggtatccgtatcggcagcccggcagttactcgtcgcggcttcaaagaagcggaagtgaaa
gagctggctggctggatgtgtgacgtgctggacagcatcaatgacgaagcggttattgag
cgcaccaaacagaaagtgctggatatctgcgcacgcttcccggtttacgcgtaa
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