Kosakonia sacchari: C813_21775
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Entry
C813_21775 CDS
T03601
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksa03021
]
C813_21775
Transcription machinery [BR:
ksa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C813_21775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHJ77050
LinkDB
All DBs
Position
1250022..1250597
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AA seq
191 aa
AA seq
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MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRA
LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN
LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIRR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttaacggatcaggtcctggtcgaaagggtccagaaaggagatcagaaa
gcgttcaacttactggtggtgcgctaccagcataaagtggcgagtctggtttcccgttat
gtcccttcgggcgatgtgcctgatgtcgtacaagagtcatttataaaagcctatcgcgcg
cttgattcattcaggggggatagtgctttttatacctggctgtaccgaattgcggttaat
acagcgaaaaattacctggttgcccaagggcgcaggccgccatccagtgatgtggacgca
attgaagcagaaaacttcgaaagtggcggtgcactgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgcgacaaatagttttccgtaccattgagtcgctcccggaa
gatttacgcatggcaattacgttgcgggagctggatggcctgagttatgaagagattgcg
gccataatggattgtccggtaggtactgttcgttctcgtatcttccgtgcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
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