Kocuria varians: CIB50_0002168
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Entry
CIB50_0002168 CDS
T06882
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0002168 (sbcC)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CIB50_0002168 (sbcC)
Archaeal homologous recombinant proteins
CIB50_0002168 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QMS57425
UniProt:
A0A7D7L017
LinkDB
All DBs
Position
complement(2479686..2482901)
Genome browser
AA seq
1071 aa
AA seq
DB search
MKLHRLEITAFGPFPQHETVDFDALNEAGVFLLNGETGAGKTSVLDAVCFALYGSGPTTV
GKGGRKVQHSDHADPHTGPCVEVEFTASGRRWCVTRTPAWREPSTRAASGWSDRHATVLL
REYTEGQWVDRGYRPDDVGQAIHHAVGLDREQFTQVMMLPQGKFAQFLQAGSREREELLE
TLFGTDVYADVQEELKARADAARADTASAQLEWERSEELFHRLGERLSQLNEQDPRSGLP
GRGPVLSPADAADGVRTASEDNSPDDDGGDDEDSGGETPPQEKPAGLSERWSALVSDCEL
ALAGAGAARDEAADRHAASQQRITELEALSGLLARFDRLAARRAELRAQSQRLEDAGRRL
EEHTAAETLTEPVTTAVRARQRVADSASAVEALRAALTQDTAGARSLRDVLRDQPDLVRE
LESTPEMPRQLRDAAVTAREAARAAAERARTLAEDETALARDEESLHALELRAEEIAAEL
TARRADLVRWEDSRQELELHVKDEGLVRERARAAREAVEASRDYARARETENARAAEFES
AETARREAARRVESLEARRYAGAAASLARELSEGDPCPVCGSTEHPCPATGDAEQDVSPG
MLQGAREDRETAQNTADAAHQRWQQAQRTSAEHLARGATEDLADVAERARRAALAEEALE
SALAELERGTEEVATVHEAVTRLETEERDVATQMAGVRTGVEAARARCASERERVTRALG
PFASVQDWVRAAEELVQLTTRWSDAQDERDAARHEERTAEEALERTLARSPFSTEAEVHE
ALMDEEEATDLTGWVTRVTSEVAALDAELATQDMQRAARLTEQQRQDASAEARHRAQSEC
DEAARHRDALNRLLGGLEGLTAEARSHAHEAPAREAALRAARDRAERLSGLAGVATATSS
ENSLRMTLTSFVLAAKLEHVAAVASEHLATMSSGRFTLVHTDQTRGSGKSGLGLEIEDAW
TGARRGTETLSGGESFFTSLALALALADVVRADAGGTEIDTLFVDEGFGSLDEQTLEQVL
ETLDGLRRGGRVIGVVSHVSEMKQRIETQLVVTKTPRGSHLRVETGSAVLT
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgcaccgtctggagatcaccgccttcgggccgttcccgcagcacgagaccgtg
gacttcgatgcgctcaacgaagccggggtcttcctgctcaacggcgagaccggtgccggc
aagacgagcgtgctggacgccgtctgcttcgccctctacggctccggacccaccaccgtg
ggcaagggcggccgcaaggtccagcacagcgaccacgcggacccccacaccgggccgtgc
gtggaggtggagttcacggcgtccggccgacggtggtgcgtcacccggaccccggcgtgg
cgggagccctccacgcgggcggcctccggatggagcgaccgccacgccacagtgctgctg
cgcgagtacacggaggggcagtgggttgaccgggggtaccgcccggacgacgtgggccag
gccatccaccacgcggtgggcctggaccgggagcagttcacccaggtgatgatgctgccc
cagggcaagttcgcccagttcctccaggccggatcccgggagcgggaggaactcctggag
acgctgttcggcacggacgtctacgcggacgtccaggaggagctgaaggcccgggcagat
gccgccagggccgacacggcgtcggctcagctcgagtgggaacgctccgaggaactcttt
caccgcctgggggagcgcctgtcgcaactcaacgagcaggatccgcggagcggtctgccc
ggaaggggacccgtcctgtcgccggctgacgcagcggacggagtgcgcacggcgagcgag
gataattccccggacgacgacggcggcgatgatgaggacagcggcggcgaaacccctcct
caggagaaaccggctggcctctccgagcggtggagcgccctcgtgtccgactgcgaattg
gcgcttgctggtgccggggccgcccgcgatgaagctgccgatcgccatgcggcctctcag
cagcggatcacggaactcgaggcgctgagcgggctcctcgcccgtttcgaccggctcgcg
gcgcgtcgagccgagctgcgggcgcagtcgcagcgcctcgaggacgcgggacgtcggctc
gaggagcacacggctgcagagaccctcacggagcccgtgaccacggcggtcagggctcga
cagcgcgtggcggactctgcctccgcggtcgaggccctgcgggcggcactcacgcaggac
accgcaggggcacggtcactccgggacgtcctgcgcgaccaacctgatctggtccgcgag
ctggagagcacccccgagatgccccggcagctgcgggacgcggcggtgaccgcgcgtgag
gccgcacgggctgcagcggaacgtgcccggaccctggccgaggacgagaccgccctggcg
cgggacgaggagagtctgcatgcacttgagctgcgagccgaggagatcgcggcggagctg
accgcacggcgcgcggacctcgtgcggtgggaggactcccgccaggagctcgaactgcac
gtcaaggacgagggcctcgtgagggagcgtgcccgggcggcgcgcgaggcggtcgaggcc
agccgtgactacgcccgggcccgtgagacggaaaacgcgcgggccgcagagttcgagtcc
gccgagactgcccggcgtgaagcggcccgccgggtggagtccctggaggcccgccgctat
gccggtgccgccgccagcctcgcccgcgaactctccgagggggatccgtgcccggtgtgc
ggttccacggagcacccgtgcccggccacgggagatgcggagcaggacgtcagccccggg
atgctccaaggcgcccgggaggatcgggagacggcgcagaacaccgccgatgcggcccac
cagcgctggcagcaggcgcagcgcacgagcgcggaacacctggcgcgcggtgcgactgag
gacctcgcagacgtcgcggaacgcgcacggcgggcagctctcgccgaggaggccctcgaa
tccgccctcgcggaactggagcgcggcacggaggaagtggccaccgtgcacgaagccgtg
acccgtctcgagacggaggaacgggacgtggccacgcagatggcgggtgtgcgcacgggt
gtggaggcggcacgtgcccgctgcgcgtcggagcgggagcgtgtgacccgtgccctcggg
cccttcgcgtccgtccaggactgggtccgggccgccgaggaactcgtgcagctcaccacc
cgctggtccgacgcgcaggacgaacgggacgcggcccggcacgaggaacggacggcggag
gaagccctcgagcgcacactcgcgcggtcccccttcagcacggaggcggaggtccacgag
gccctcatggacgaggaggaggccactgacctgaccggctgggtcacgcgtgtcaccagc
gaggtcgcggcgctggacgcggaactcgcgacccaggacatgcagcgcgccgctcggctc
accgagcagcaacgccaggatgcgtcggcggaggcacgtcaccgggcccagtccgagtgc
gacgaggcggcgcggcacagggatgcgctcaaccggctgctcgggggcctcgaaggcctc
accgccgaggcgcggtcccatgcccacgaggcacccgcccgagaagccgcactgcgagct
gcccgggaccgtgcggaacgcctgagcgggctcgccggcgtggccaccgcgacttcctcg
gagaactccctccgcatgaccctgacctccttcgtcctggccgcgaaactggaacatgtg
gcggccgtcgcctccgagcacctcgccacgatgtcgtccgggcggttcactctcgtgcac
accgaccagacccggggcagtggcaagtccggcctggggctggagatcgaggacgcctgg
accggagcacgccgcggcaccgagaccctctccgggggcgagtcgttcttcacctcactg
gcgctggcactggcgctcgcggacgtcgtgcgggcagatgccgggggcacggagatcgac
acgctgttcgtggacgagggcttcggctccctggacgagcagacgctggaacaggtcctg
gagaccctggacgggctgcgccgcggtgggcgggtgatcggggtggtctcccacgtgagc
gagatgaagcagcggatcgagacccagctggtggtcaccaagaccccccggggttcgcac
ctgcgcgtcgagaccggttctgcggtgctcacgtag
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