Lachnoclostridium sp. YL32: A4V08_02640
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Entry
A4V08_02640 CDS
T04430
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy00300
Lysine biosynthesis
lacy00550
Peptidoglycan biosynthesis
lacy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A4V08_02640
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A4V08_02640
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lacy01011
]
A4V08_02640
Enzymes [BR:
lacy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
A4V08_02640
Peptidoglycan biosynthesis and degradation proteins [BR:
lacy01011
]
Precursor biosynthesis
Amino acid ligase
A4V08_02640
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
ANU44883
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Position
complement(704085..705620)
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AA seq
511 aa
AA seq
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MILRTWLNELDYELVRGSLDAEVTEVVYDSRKAVPGAVFVCMAGTRVDSHCFVPDVLRAG
VRVLVTERDVEEELAASGLTEDEMCRVTILKTAEGRKSLALLSAARFGYPATGMITIGVT
GTKGKTTTTHMIKAILEAAGKKVGMIGTTGTVINGQVTPTMNTTPESYELHQSFAKMAEA
GCQYMIMEVSSQGIRMHRVDGISFDYGIFTNISPDHIGPDEHADFAEYLYCKSRLLNMCR
IGLVNLNDGHFQEIVKDASCRLYTYRVKEDRETKADFEASNIRYVSRPDFVGTEFDVTGK
LDMDVRLGIPGLFNVDNALAALCVCSFLGLPGERIVHALEHIRVNGRMEIVHTSSRCTVL
VDYAHNAVSMESLLTTLRQYHPKRLVVVFGCGGNRSKDRRYSMGEIGGRLADLSIITADN
SRYEKVEDIMADIRGSIERTGGAFLEIPDRRDAIRHSILHAKPGDMIAVIGKGHEDYQEI
NGVRHHFLDREVIEETIKELGDEIQYDRNNG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatacttagaacctggttaaatgagctggattatgaacttgtcaggggaagcctggat
gcggaggtcacagaggtggtctatgactccagaaaggcagtgcccggcgctgtgtttgtg
tgtatggcggggacccgcgtggattcccactgttttgttcccgatgtgctgcgcgcaggc
gtccgcgtgcttgtgacggagcgggacgttgaggaggagctggctgcctcaggacttacg
gaggatgagatgtgccgggtgacaatacttaaaacagcggagggcaggaaaagcctggct
cttctctcggcagccaggttcggctatcctgcgacaggaatgatcaccattggcgtcacc
ggaacaaagggaaaaaccaccaccacccatatgataaaagccattcttgaggcggcggga
aaaaaggtggggatgataggcaccacaggcacggtgatcaatggccaggtgaccccaacc
atgaataccacgccggaatcctatgaactgcaccagtccttcgcgaaaatggcggaggca
ggctgccagtatatgattatggaggtgtcgtcccagggaatcaggatgcaccgggtggac
ggcatctcctttgactacggcatttttaccaatatatccccggaccacataggaccggat
gagcacgctgattttgcggaatatctttactgcaaatcgcgccttttgaatatgtgcagg
atagggctggtgaacttaaatgacgggcattttcaagagatcgtgaaggatgcgtcctgc
aggctctatacgtaccgcgtaaaggaagacagggagacgaaagctgactttgaggcgtcc
aatatccggtatgtgtcccggccggactttgtgggcacggagtttgacgtcacaggaaaa
ctggatatggacgtccgcctgggaatccccggcctgtttaacgtggacaatgccctggca
gccctgtgcgtatgctcctttctgggacttccgggagagaggattgtccacgcactggag
cacatacgtgtcaatggacgcatggaaattgtccacacctcatccaggtgcaccgtcctg
gtggactatgcccataacgcagtgagcatggagagccttcttaccactctgcgccagtat
catcccaaacgcctggtggttgtatttggatgcggcggaaaccgttccaaggacagacgc
tactccatgggcgaaatcggaggaagactggctgatctgagcatcatcacggcagacaac
tccaggtatgaaaaggtggaggacatcatggcggatatccggggaagtatcgagagaaca
ggcggggccttccttgagattcctgacagaagggacgcaatccgccacagtatccttcac
gccaagccgggggatatgatagctgtcatcggcaaaggacacgaggattatcaggaaatc
aacggtgtgcgccatcacttcctggacagggaagtcattgaagaaaccataaaagagttg
ggagacgagatacagtatgacaggaataacggttaa
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