Lactobacillus acetotolerans: LBAT_0539
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Entry
LBAT_0539 CDS
T03976
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lae
Lactobacillus acetotolerans
Pathway
lae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBAT_0539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lae03400
]
LBAT_0539
Enzymes [BR:
lae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LBAT_0539
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LBAT_0539
DNA repair and recombination proteins [BR:
lae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBAT_0539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAQ56928
UniProt:
A0A0D6A278
LinkDB
All DBs
Position
540006..540836
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AA seq
276 aa
AA seq
DB search
MPEMPEVETVRRTLIPLVKGKTIKKVTLWFPKIVSTDHDKFINELPGKKIIDIDRYAKFL
LIRLTGNLTIVSHLRMEGKYHLTSVNAPKDKHDHVQFEFTDGTALRYNDVRKFGRMQLVL
TGTERMTTGIGKLGYEPNSAEFTDDYFIDSLKRKKKNIKSTLLDQTIVAGLGNIYVDEVL
WRTKIHPLSAASKISRKKVIELRKNINDIISLAIKMHGTTVHTYLDANGHSGGFQKELKV
YGHAGEPCVVCGTTLKKIKVAGRGTTFCPHCQVIYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatgccggaagttgaaactgttcgtagaacattaattccacttgttaaggga
aagacaattaaaaaggttactttatggtttccaaaaattgtttccaccgatcatgataaa
tttattaatgagttgcccggtaaaaagattattgatattgatcgttacgcgaaatttttg
cttattcgtttgacggggaacttgacgatcgtttctcatttgcgaatggaaggaaaatat
catttaacgagtgtaaatgcacctaaagataaacatgatcatgttcagtttgaatttact
gatggaacggcactgcgttataatgacgtgcgtaaatttggacggatgcagttagttcta
actggtaccgaaagaatgacgacaggaattggtaagttgggttatgaacctaattctgct
gaatttacggatgattattttattgatagtctaaaacgcaaaaaaaagaatattaagagt
actctgctggatcaaacaattgtggcaggtcttggtaatatttatgttgatgaggttctg
tggagaaccaaaattcatccgttaagtgctgctagcaagatttctcgtaaaaaagtgatc
gaattacgcaagaatattaatgatattatttcattggcaattaagatgcacggaacgacc
gttcatacctatttggatgcaaatgggcatagcggtggctttcaaaaagagcttaaagtg
tatggtcatgccggtgaaccgtgtgtggtatgtggcaccacccttaaaaagataaaagtt
gctggtcgggggacgactttttgtcctcactgtcaggtaatttataaatga
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