Roseibium aggregatum: B0E33_07990
Help
Entry
B0E33_07990 CDS
T04723
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
lagg
Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lagg03019
]
B0E33_07990
Enzymes [BR:
lagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B0E33_07990
Messenger RNA biogenesis [BR:
lagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B0E33_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Flavi_DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQQ03544
LinkDB
All DBs
Position
1709808..1712279
Genome browser
AA seq
823 aa
AA seq
DB search
MSSAPAFAAPLPIDGVLPELLATLDTGLNAVLVAEPGAGKTTRVPLALLNATWRGDGKIL
VLEPRRLAARAAARRMAAELGEKPGETVGYRVRMETKVSARTRIEVITEGVFTRLILDDP
ELTGVAAILFDEFHERSLDGDLGLALALDVQAALRDDLRLLPMSATLDAAGISALLGDAP
VIESTGRSYPVETRYLGRTPNERIEPQMVRAIRQALSEETGSMLVFLPGQGEIRRTAEML
EGKLPAGCQVAPLYGGLDAKAQDAAIRPADAGSRKIVLASAIAQTSLTIEGVRVVIDSGL
ARVPKYEPQTGLTRLETVRVSRASADQRRGRAGRTEPGVCYRLWDEAQTVALPQAEAPEI
LEADLTGLVLDLAAWGTLDPAALAFADQPPLAAWSEAKLLLQDLHALDDHGRLTNDGKAL
AKLPLHPRLAHMVIEGVARDLGFTAAMIALVLSEPGLGGRDPDLRARLQALRHDKSQRVK
DGRQLAERWLKQAGGTGREIDPESAGLLLALAYPDRVAQQRGQTGRFRLANGRGAELEAE
HALSRQAFLTVADTQGKAASGRIQLCAPISKSDIEDLFAADIVEQDEVQLTGDGALKARR
VTRYKAVELKSVQIQSADPAAVERALIAEIRRRGVSRLPWSKEQERLKKRVAYARENGAQ
DLPDLSDGTLTETLETWLQPYLAGCTSLAAIDTAVLGNALAALLPYDASARLDNLAPSHF
TAPTGSKVPIDYGAAAGPTLSIRVQELFGLKDHPSVCDGRLPLILELLSPAQRPIQITKD
LPGFWQGSWADVKADMKGRYPRHPWPDDPTAAEATRRAKPRGT
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgccccagccttcgcggcaccactgccgatcgacggtgtcctgccggagctt
ctggcaacgcttgatacagggctgaacgcggttcttgttgccgaaccgggcgcgggcaag
acgacccgcgtgccgctggctcttttgaacgcgacctggcgcggcgacggcaagatcctg
gtgctggaaccgagacgtcttgctgcccgtgccgctgcacgccggatggcagccgaactt
ggcgaaaagcccggcgagaccgtcggctaccgtgtgcgcatggaaacgaaagtcagcgcc
cgtacccggatcgaggtcatcacggaaggtgtattcactcgactgatcctggacgatccg
gaactgacgggcgttgccgccattctctttgacgaatttcacgaacgctcgcttgacggc
gacctcgggctggcgctggcgctggatgtgcaggctgcactgcgcgacgacctgcgtctg
ctgccgatgtccgcaacgctcgatgctgcaggaatttcagccctgcttggcgacgcgccg
gttatcgaaagcacggggcgcagctacccggttgaaacgcgttacctggggcgaacaccc
aacgagcgcatcgaaccgcagatggtgagggcgatccggcaggctctttctgaagaaaca
ggttccatgctggtgtttctgcccggccagggcgaaatccgccgcaccgctgagatgctg
gagggcaagctccctgccggctgccaggtggcaccactttacggcggactggacgccaaa
gcccaggacgcagccattcggccggccgatgccggcagccgcaagatcgtgctggccagt
gccatcgcacagacctcgctgaccatcgaaggtgtgcgtgtcgttatcgacagcggtctg
gcacgggtgccgaaatatgaaccgcagaccggactgacccggctggaaaccgtgcgcgtc
tcccgcgcttccgctgatcagcgacgaggccgcgccggacgtaccgagcccggtgtctgc
tacaggctctgggacgaagcccagaccgtggccctgccacaggcagaggctccggaaatc
ctggaagcggatctcaccggcctggtgctggacctggcggcctgggggacgctcgatccg
gcagccctcgcctttgccgaccagcccccacttgcggcctggagcgaagcgaagcttctg
cttcaggatctgcacgctctggatgaccacggacgtctgaccaatgacggcaaggcactg
gcgaaactcccgctgcatccacgcctggcccacatggtgatcgaaggtgttgcccgcgat
ctcggctttaccgccgcgatgatcgcgctggtgctgtccgaaccgggtcttggcggccgg
gatcccgacctgcgtgcgcgtttgcaggctttgcgccacgacaagagccaacgtgtaaaa
gacggccgccaacttgccgagcgctggctgaagcaggcaggcggcacaggcagggagata
gatccggaaagcgccggacttctgctcgcccttgcctatcctgaccgggtggcccagcag
cgcgggcagacaggacgcttccgccttgcgaacggccgtggcgcagaattggaggcggaa
catgccctttcccggcaagccttcctgactgttgccgatactcagggcaaggcggcaagc
gggcgtatccagctctgcgcgccaatttccaaatccgatatcgaagacctgtttgctgca
gacatcgtcgagcaggatgaagtccagttgacaggagatggtgcgctgaaggcgcggcgt
gtcacccgctacaaggcggttgaactgaagtccgtccagatccagtcagcagatccggca
gctgtcgaacgggccctgattgccgagatccgccggcgcggcgtctcccgcctgccctgg
agcaaggaacaggaacggctgaagaaacgtgtcgcctatgcccgggagaacggcgcgcag
gatctgccggacctttccgacggcaccttgacggaaaccctggaaacctggctgcagccc
tatctcgccggctgcacgagccttgccgcaatcgataccgccgtgctgggcaacgcgctt
gcggcgctcctgccctatgatgcatctgcacggctggacaaccttgccccctcgcacttc
acggccccgacaggcagcaaggtgccgatcgactatggtgcggccgcaggtccgacgctt
tccattcgcgtgcaggaactcttcggcctcaaggatcatccgagcgtctgtgacggcaga
ctgccgctgatcctggaactactctccccggcacagcgcccgatccagatcacgaaggat
ctccccggcttctggcagggttcctgggcggatgtgaaagccgacatgaaaggccgctac
cccaggcacccctggccggacgacccgaccgcagccgaggcaacgcgcagggcgaagccg
cggggaacctag
DBGET
integrated database retrieval system
