Lacimicrobium alkaliphilum: AT746_03245 Help Entry AT746_03245       CDS       T04189                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism lal  Lacimicrobium alkaliphilum Pathway lal02020   Two-component system lal02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:lal00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AT746_03245  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AT746_03245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lal03021]     AT746_03245 Transcription machinery [BR:lal03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AT746_03245 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  ALS97387 UniProt:  A0A0U2QJT8 LinkDB All DBs Position complement(682779..684254) Genome browser AA seq 491 aa AA seqDB search MKPALQLKFSQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPLLETEESADQNTEER RDADSLNGESNEASNSKDSDSIETGEALEKQELPEDLPMDTTWDEYYSASSAPGSSAVSA ADDNIYQGETSDSIQDHLLWQMRLTHFSDTDQAIAMAIIDSIDDVGYLTVTTEDILQSLD NEEVELDEVDCVLKRIQMFDPVGVGSRSVQECLLVQLRQFPPETPWLEQAKSLILEYSDL LASKDYRTLMRKARLKEDELREALRLLQTLNPRPGSAIATSEPEYVIPDVSVAKKNGRWT VELNPDSLPKLSINQQYAAMSKNTRNASDSQFIRSHMQEAKWFIKSLESRNDTLLKVANC IVQQQQGFFEYGPEAMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRGIFELKYFFSSH VATESGGECSSTAIRALIKKLVAAEKPAKPLSDSKIAQLLAEQGIKVARRTIAKYRESLS IPPSNQRKSLL NT seq 1476 nt NT seq  +upstreamnt  +downstreamnt atgaagcctgcattacagttaaaattcagccaacaacttaccatgacgcctcagttgcag caggcgattcgcctgttgcaactgtccacgctggatttacaacaggagatccaggaggcg ctggagtctaatccgctgctggagacagaagaatctgccgatcagaatacggaagagcgc cgcgatgccgacagcctgaatggtgagtccaacgaagccagtaacagcaaagacagtgac agcatcgaaaccggcgaagccctggaaaagcaggagttgcccgaagatctgccgatggat actacctgggatgaatattacagcgcctcatcggcacccggttcttctgcggtcagtgcc gccgatgacaatatctatcagggggaaacctcggacagcattcaggatcatttgctctgg caaatgcgtctgacccatttcagtgacaccgaccaggccattgccatggccattatcgac tctattgacgatgtcggttatctgaccgtcaccactgaagacatcctgcaaagcctggac aatgaagaagtagaactggatgaagtagattgtgtacttaaacgcattcagatgttcgac cctgttggcgtcggcagtcgcagcgtacaggaatgcctgctggtacaattacgtcagttc ccccctgaaacgccatggctggagcaggcaaaatcactgatcctcgaatacagtgatctg ctggccagcaaagattaccgcaccctgatgcgcaaagcccggcttaaagaggatgaactg cgtgaagccttacgtttattacaaaccctgaaccccaggccaggcagtgccatcgctacc agtgaaccggaatatgtgatccccgatgtatcggtagccaagaaaaatggccgctggacc gtagaactgaatcccgacagcttgcctaaactgagtatcaatcagcaatacgcggcgatg agcaagaataccaggaacgccagcgacagccagtttatccgctcccatatgcaggaagcc aagtggtttattaaaagcctggaaagccgcaatgacaccctgctgaaagtggcaaactgt attgtgcagcagcaacagggctttttcgaatacggccccgaggccatgaagcctatggtg ctcaacgatgttgctgaaatggtggatatgcacgagtccaccatctccagagtgaccacg cagaaatatatgcacacaccaagaggcatttttgagctcaagtatttcttttccagccat gtggccacagaaagcggcggcgaatgttcctccaccgccattcgtgctctgatcaaaaaa ctggtggcggcagaaaaacccgccaaacccctgagcgacagcaaaattgcacagttgttg gccgagcaaggtattaaagttgcccggcgaacaatagcaaaataccgggaatccctgtcg attcccccgtccaaccaacgcaaaagcctgttatag

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