Lacinutrix sp. 5H-3-7-4: Lacal_1989
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Entry
Lacal_1989 CDS
T01533
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lacal_1989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lan02000
]
Lacal_1989
Enzymes [BR:
lan01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Lacal_1989
Transporters [BR:
lan02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Lacal_1989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
AAA
APS_kinase
AAA_29
AAA_22
nSTAND3
AAA_24
ABC_ATPase
AAA_16
DEAD
AAA_25
YfmQ
DPPIV_rep
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AEH01835
UniProt:
F6GF38
LinkDB
All DBs
Position
complement(2235265..2237094)
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AA seq
609 aa
AA seq
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MNYLKKILTYALPYKKYAILNIISNIFYALFGALSFFALMPMLNVLFPKDGEVKVVNKPV
YTGIRTLGDYFNDTLAYQIQYFAQDDKSKALVFVIVLVVVTFLLKNLFNYLGLYFGTFLR
NGILKDLRDDLYDKTINLPISFYSEKRKGDIIARISNDVAQVKNSFLAVLEMIIKEPLSI
VFSIGGMLIISVKLTIFVFIFIPVSGFIISAIGKRLKRQSAAVQNEQGIFLSTVEETLNG
LKVIKGFNAEGIFNSKFQDSTKRYFHFSNILLNRQNLSSPVSEILGIVTISVLLWFGGRM
VLLENSLDSASFLTFMGLAYNILTPAKAISKASYAVKQGNAAAERVLEIIETKSPIEDAP
NAKTLNGFNEAISIDNIYFKYEDDYVLKDFSIKVPKGKTVALVGQSGSGKSTIANLVTRF
YDVNKGSISIDGQNIKDLTKNSLRSTMGLVTQDSILFNDSIKNNILVGKPNAKDQEIIEA
LKIANAWEFVKDLPKVLETNIGDSGNKLSGGQKQRLSIARAVLKNPPIMILDEATSALDT
ESERLVQDALENMMKNRTSIVIAHRLSTIQNADEIIVMQKGEIAEQGKHETLIAKNGIYK
KLVDMQSFE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttaaaaaagattttaacctacgccttaccgtataaaaagtatgccatatta
aatattataagtaatatattttacgcactatttggagcattatcattctttgctttaatg
ccaatgcttaacgtattattccctaaagatggtgaagtaaaagttgtaaataaacctgta
tataccggaataagaactttgggcgattattttaatgatacgctagcctaccaaattcaa
tattttgctcaagatgataaatctaaagcattagtttttgttatagttttagtagtagtt
acatttttactcaaaaatttatttaattatttaggcctatattttggcacatttttacgt
aacggtattttaaaagatttacgagacgatttatacgataaaaccataaacctacctatt
tctttttattctgaaaaacgaaaaggagatattattgccagaatttctaatgatgtggct
caagtaaaaaattcctttttagctgtcttagaaatgataataaaagaacctttaagtatt
gtttttagtattggaggtatgctaattattagcgtaaaacttaccatttttgtatttata
tttattcctgtgtctggttttataatttcggcaataggtaagcgcttaaagcgccaatcg
gcagctgtacaaaacgagcaaggtatatttctttctactgttgaagaaactttaaacgga
cttaaagttataaaaggatttaatgcagaaggtatatttaacagcaaatttcaagactct
accaaacgttactttcatttttcaaatattctattaaacaggcaaaacctatcttctccc
gttagtgaaattttaggtattgtaaccatttctgtattattatggtttggaggccgtatg
gtattattagaaaactcactagacagtgcttcatttttaacttttatgggtttagcctat
aatattttaactcctgccaaagccataagcaaagcatcttatgcagtaaagcaaggcaac
gcagcagcagaacgtgttttagaaattattgaaactaaaagcccaattgaagatgctcca
aatgctaaaactttaaatggttttaatgaagctatatctatagacaatatttattttaaa
tatgaagacgactacgtactaaaagacttttctataaaagtacctaaaggaaaaactgta
gcattagtaggccaatctggaagtggaaaaagtacaatagcaaacctagtaacacgcttt
tacgatgtaaacaaaggaagcataagtattgatggacaaaatattaaagaccttactaaa
aactctttaagaagcacaatgggattggttactcaagactctatactatttaacgactct
ataaaaaataacatattagttggaaaaccaaacgctaaagatcaagaaataattgaagca
ttaaaaattgcaaatgcctgggaatttgtaaaagatttacctaaagttctagaaacaaac
attggtgattctggaaacaaactttctggcggacaaaaacaacgtttaagtattgctaga
gctgtacttaaaaatcctccaattatgatattagatgaagcaacttctgctttagataca
gaaagcgaaagactagtacaagacgcattagaaaacatgatgaaaaacagaacatcaatt
gtaattgcgcatagattatctactattcaaaatgcagacgaaattattgttatgcaaaaa
ggagaaattgccgagcaaggtaaacacgaaacactaattgctaaaaacggaatctataag
aaacttgtagacatgcaaagtttcgagtaa
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