Lupinus angustifolius (narrow-leaved blue lupine): 109326452
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Entry
109326452 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109326452
03041 Spliceosome [BR:
lang03041
]
109326452
03036 Chromosome and associated proteins [BR:
lang03036
]
109326452
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109326452
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109326452
mRNA cycle factors
Common to processing body (P body) and stress granule
109326452
Spliceosome [BR:
lang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109326452
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109326452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109326452
NCBI-ProteinID:
XP_019414685
UniProt:
A0A4P1QZT3
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All DBs
Position
LG14:2666095..2671049
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AA seq
618 aa
AA seq
DB search
MRTSWADLAANSAADNASYANNAGSGNNTSAPPSRPAYVPPHLRNRPPPTAESPAPPPAR
TGPASGSGTGTGTGTGRWSAPRNEYRSGTGGSGHTSGWGNKSAGWDRGRDREVNPFADQD
DSEPAFTDQENTGINFDAYEDIPVETTGENVPPPVNTFAEIDLGEALNENIRRCKYVRPT
PVQRNAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQPMQRPPRGVRTVYPLALV
LSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLL
ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGDRQTMLFSATFPREIQR
LAADFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRENGVQGKQALTL
VFVETKKGADALEHWLYLNGFPATTIHGDRTQQEREFALRSFKSGNTPILVATDVAARGL
DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNANLARSLADLMQEANQ
EVPAWLSRYAARSSFGGGRNRRSGGGDRFGGRDFRREGSFSRGGGSDYHSAGNSGGGYGA
SGGYAGGYGGPGVTSAWD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgatttggctgcaaattctgcagctgataatgcttcttatgct
aacaatgccggatcaggtaacaacacttcagctcctccttcccgaccagcttatgtgcct
ccacatctgaggaaccgtccgcctccaacagctgaatcccctgctcctcctcctgcacgt
accggccctgcttccggttctggtactggtactggtactggtactggtaggtggtctgct
cctagaaatgaataccgttctgggactggtggcagtggccacacaagcggatgggggaac
aaaagtgccggatgggaccgtggcagggatcgtgaagtcaacccctttgcggaccaggat
gattctgaaccggcattcactgatcaggagaatactggaataaattttgatgcatatgaa
gacattccggttgagaccactggtgaaaatgttcctcctcctgtcaacacatttgcagag
attgacttgggtgaagcgctcaatgagaatataagaaggtgcaaatatgtgaggccaaca
cctgttcaacgtaatgccataccgatatcccttgcaggacgggatttgatggcttgtgcc
cagactggttctggaaagactgctgctttttgtttcccaatcatcagtgggattatgagg
ggccagcccatgcagaggccacctcgtggtgtgcgtactgtgtacccactagcccttgtt
ctctcaccaactagggagctgtcaatgcaaatacatgaagaggctagaaagttttcatac
caaaccggggttagggttgttgttgcttatggtggagctccaataaaccagcagctacgg
gatctggagagaggggtggacattcttgtagcaactccaggtagactggtagatttgctg
gaaagggctagagtttcactacagatgatcagatatctagccttagatgaggcagatagg
atgctggatatgggttttgagccccagataaggaaaattgtggaacagatggacatgccc
ccaccaggtgatagacagactatgctgttcagtgccacatttccaagagaaatacagaga
ttagcagctgatttcctttcaaactatatttttttggctgttggaagagtgggctcgagt
actgatttaattgaccagagagttgagtatgttcaggagtctgacaagagaagtcatctc
atggaccttcttcatgcacagagggaaaatggtgtccaaggaaagcaagctttaacttta
gtctttgtggagacaaagaagggagctgatgcactggagcactggttgtatctaaacggt
tttccagcaaccactattcacggtgacagaacacaacaggaaagagaattcgcgttgagg
tcatttaaaagtggcaacacccctatattggtcgccactgatgtggctgcacgtggtctt
gatattcctcatgttgcccatgtggttaactttgaccttcccaatgatatcgatgattat
gtgcaccgtattggaaggacaggtcgagcaggaaagaaaggtctcgccactgcattcttt
aatgacaacaatgcaaacctagcaaggtctttggcagatctgatgcaagaagcaaatcaa
gaagtgcctgcatggctttcacgttatgctgctcggtcttcctttggtggaggaaggaac
cgtcgatcaggaggaggagaccgttttggaggccgtgactttcgaagagaaggttctttc
agtaggggtggtggttctgattaccatagtgctggaaacagtggtggtggatatggagca
tctggtggttacgctggaggatacggcggtcctggggtaactagtgcatgggactga
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