Lupinus angustifolius (narrow-leaved blue lupine): 109329661
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Entry
109329661 CDS
T04664
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109329661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109329661
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109329661
mRNA degradation factors
5'-3' decay
Decapping complex
109329661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
GerPC
TrbI
Motif
Other DBs
NCBI-GeneID:
109329661
NCBI-ProteinID:
XP_019418924
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All DBs
Position
LG16:complement(2568622..2577769)
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AA seq
1376 aa
AA seq
DB search
MAFHGNPNQQQQQHLQTQTPLFDLNKVFNPTSSNNPLPSNPLNLNTSPSFPSPSPSTPPP
SSFPNPSSSYPPPTGTYPFHNPHFFPYPNLQQQQQQHQQQQQQHLHPMNVPQRPIFQPSP
SSPNPNTTSGARLMAILGTQNPPSNHDSPVLYQASNEFSVPAVAPSPASPQAATTTPGRM
LSTKFPRGRRLIGENVVYDIDFKLPGEVQPQLEVTPITKYASDPGLMLGRQIAVNRTYIC
YGLKLGAIRVLNINTALRYLLRGHTQKVTDMAFFAEDLHLLASASTDGRIFVWKINEGPD
EEDKPQIAGKVITAIQILGESESVHPRVCWHPHKQEILMVAIGNRILKIDTMKAGKGETF
SAEEPLQCSIDKLIDGVHLVGKHDGNVTELSMCQWMKSRLASASEDGTVKIWEERNATPL
AVIRPHDGKPVNFVTFLTAPHRPDHIVLITAGPLNQEVKIWVSDNEEGWLLPSDSESWSC
IQTLDIRSSSKANPEDVFFNQVVALPRAGLFLLANAKKNTIYAVHIEYGPSPTATHMDYI
AEFTVTMPILSLTGTSDGLPDGEHIVQIYCVQTQAIQQYALNLSQCLPPALDNAELEKTE
LNLSHSSNALNEFSNLETGNMPQVHSSNSESAPVVSLPVNLSSDISGLPEASTSDIETKP
NDLHSHHGFEHIQSSPPPHPPSPRLSHKLSGFKGSSNNLETRSTNVDHNNDQTNLESSAE
RRVESEKDITGDVPASGDILRKNDGLVQNDVSVVSNSPTTFKQPTHLITPSEIFSKAALS
SENPQTSQGMNVQDVAAHDDAENLEVEVKVVGEAGSNQENTEYDRDRDSHTDVAEKKEKL
FYSQASDLGIQMAREAYNAEGVRQADNIKTIDVPDQSSNTIEEEVQNTNKEPPANNDESE
TVAANLQSPAPAVKGKRQKGKSSQVSGISPSSSPFSSTDLANNQGGNSGGSSVEAALPQL
STMHDMLSQLLSMQKEMQKQMNVIVSAPVTKEGRRLEGSLGRSMEKVVKANTDALWARLQ
EENAKQEKLELDRTQQITNLISDYVNKDMTTVLEKIIKKEISSIGSTVARSVSQSVEKTV
SSAIMESFQKGVGEKGLNQLEKSVSSKLEATVARQIQTQFQTSGKQALQEALRTSLEASI
LPAFEKSCKAMFDQIDVTFQNGLTKHTTAIQQQYDSTHSPLAMTLRETINSASSIAQTLS
GELAEGQRKLIEIAANSKIAADPFVTQINNGIHEMAEDPTKELSRLISEGKFEEAFIGAL
HRSNVSIVSWLCSQVDLPGILTMVPLPLSQGVLLSLLQQLSCDINTETPKKLAWMTDVAA
ALDPVDPRISAHVRPILDQVYRTLGHHRTLSTTSPGEASTIRLLMHVINSVLVSCK
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcatggaaatccaaatcaacaacaacaacaacatttacaaacacaaacaccc
ctttttgatttgaataaggttttcaatccaacatcatcaaataaccctttaccttcaaat
ccattaaatttgaatacttcaccttcattcccttctccttctccttctacacctcctcct
tcttcattccctaacccttcttcttcttaccctccacccactggcacatacccttttcac
aatcctcacttttttccttatccaaatcttcagcaacaacagcaacagcatcagcaacag
caacagcaacaccttcatccaatgaatgttccacaaagaccaatttttcaaccctctcct
tcatcaccaaaccccaacaccacaagtggtgcaaggcttatggccatattgggcacccaa
aaccctccctctaaccatgattcacctgttctgtaccaagcatcaaatgaattctcagtg
cctgcagtggcgccttctccggcgagccctcaggctgccaccaccacgccgggtaggatg
ctgagcactaagtttccgagggggcggcgtttgattggagagaatgttgtttatgacatt
gattttaagctgccaggtgaggtgcagcctcagcttgaagtcactcctattaccaagtat
gcatctgaccctggcctcatgctcggccgccaaatcgcggtgaataggacttatatttgc
tatggactcaaacttggtgccattcgggtgctcaatattaatactgcattgagatatttg
ctgagaggtcatactcagaaagtaacagacatggctttctttgctgaagatcttcacctg
ttggccagtgctagcactgatggaagaatttttgtatggaagatcaatgagggccctgat
gaggaagacaagcctcaaattgctggaaaagttattacagccattcaaatattaggagag
agtgaatcggttcatccacgagtatgctggcatcctcacaaacaagagattttaatggtt
gctattggaaaccgtatcctcaaaattgatactatgaaagctggaaaaggtgaaactttt
tctgcagaggagcctcttcaatgttccattgataagttgattgacggggtgcaccttgtt
ggtaagcatgatggaaatgtcaccgagttgtcaatgtgccaatggatgaagagtcggtta
gcttcagcatcagaagatggcacggtaaagatatgggaagaacgtaatgcaacaccactt
gcagttataagaccgcatgatggtaaaccggttaattttgtgacattcttgactgctcct
caccgccctgatcacattgttcttatcacagcgggcccactaaatcaggaggtgaagata
tgggtctctgacaatgaggaaggttggttattgcctagtgattccgagtcatggagttgc
attcagactttagatatacgaagttcttctaaagccaaccctgaggatgtgttctttaat
caagttgtagcactgccccgtgctggtttgtttctattagcaaatgccaagaaaaataca
atatatgctgtgcacatagagtatggaccgagtcctactgccactcacatggattacatt
gctgagttcacagtcacaatgcctatattaagtcttacgggtactagtgatggtttaccg
gatggagagcatattgtacagatatattgtgtccaaacacaagctattcaacaatatgcg
ctgaatttgtcacaatgtttgcctccagccctggacaatgctgaactagaaaaaaccgaa
ctcaatctatctcattcctctaatgctttgaatgaattttctaatctggaaaccggaaat
atgccacaagttcattctagcaactctgaaagtgctcctgttgtgagccttcctgtaaat
ttgtcttcagatatttctggtctacctgaagcttctacttcggatatagaaaccaagcca
aacgatttgcattctcatcatggttttgagcatatccaatcttctccacctccacatcct
ccgagtccaagattgtcccataagttatctggtttcaaaggttcatcaaataatctagag
actagatcaacaaatgttgatcacaacaacgatcagacaaatcttgagtcttcagctgaa
cggagagtggagtctgaaaaggatattacgggtgatgtgcctgcatcaggtgacattttg
aggaagaatgatggacttgtacaaaatgatgtctctgtggtttctaactcccctacgaca
tttaaacaaccaacacatttgataactccgtctgagatattctccaaagctgctttatct
tctgagaatcctcaaacatctcaaggtatgaatgtgcaagatgtggctgctcatgatgat
gcagaaaaccttgaagtagaggttaaagttgttggtgaggcaggttctaatcaagaaaat
actgagtatgacagagacagggactctcacactgatgttgccgagaagaaagagaagtta
ttctattctcaagcctctgatctgggcattcagatggctagagaggcctataatgccgag
ggagttcgtcaggctgataatattaagactattgatgttcctgatcaaagttctaacact
attgaggaagaagttcaaaacacgaataaggaacctcctgcaaataatgatgaatcagaa
actgtggccgctaatttgcaatctccagcacctgccgtgaaaggtaaaagacagaagggc
aaaagctctcaagtgtctggtatatctccttctagcagtccttttagctcaaccgattta
gcaaacaatcaaggtggcaattcaggtggctcgtccgtggaagctgctctaccccagtta
tccactatgcatgacatgctgagccagttgttaagcatgcagaaagaaatgcaaaagcaa
atgaatgtgattgtttcggcccctgttaccaaggaaggcagaagattagaaggatcctta
ggtcggagcatggagaaagttgtcaaggctaacactgatgctttgtgggctcgcttacaa
gaagaaaatgcaaagcaagagaagttagagctagatcgtacacagcaaataacaaacttg
atctccgattatgtaaacaaggatatgacaactgtattggagaaaatcattaagaaggaa
atatcttcaattggatcaactgttgctcgttcagttagtcaaagtgtagagaaaacagtc
tcatctgccatcatggagtcattccagaagggagtgggagagaagggtctgaatcaacta
gaaaaatctgttagttctaagcttgaagctacagtggctaggcaaatacaaacacaattc
caaacttctggcaagcaagctcttcaggaagcacttcggactagtttggaggcttcaatt
cttccagcatttgagaagtcttgcaaagctatgtttgaccaaatcgatgtcacgtttcag
aatgggcttacaaagcacacaactgctattcaacagcagtatgattctactcattctcct
ctggccatgactttgagggaaacaattaattcagcatcatcaatcgctcaaactttgagt
ggggaattggctgagggccagcgtaaactgatagaaattgctgctaactccaaaatagct
gcagatccctttgtaactcaaatcaacaatggcatacatgagatggctgaggatcctacg
aaagaactatcaaggttgataagtgagggcaagtttgaggaagcattcattggagccctt
cataggagtaatgtttcaatagtttcttggttatgttctcaggttgatttacctggtatc
ttgacaatggtaccactaccattaagccagggagtacttttgtctcttctacagcaattg
tcctgtgacatcaataccgagactcccaaaaaattggcatggatgaccgatgttgctgct
gctttagaccctgtagatccaaggatttcagctcatgtgcgaccaatattggatcaagtg
taccggacactaggccatcatcggactttatcaactacctcccccggggaagcaagcaca
atccgccttctcatgcacgtcataaactcggtgttagtgagctgtaaataa
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