Lupinus angustifolius (narrow-leaved blue lupine): 109346096
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Entry
109346096 CDS
T04664
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109346096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109346096
Spliceosome [BR:
lang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109346096
Complex C
U5 SnRNP specific factors
109346096
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
109346096
NCBI-ProteinID:
XP_019441022
UniProt:
A0A1J7I2V5
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Position
LG01:complement(2047873..2053176)
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AA seq
990 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIDSDVDSDREEDNDDDDDQDRLTNHRDGDASDGDAPNNGWITTS
NDVDMLDNQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQSLEQPIIKPVRNIKFEVGVK
DSTTYVSSQFLLGLMSNPTLVRNVALVGNLQHGKTVFMDMLVEQTHHMCTFDPQSEKHMR
YTDTRVDEQERRISIKAVPMSLVMEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAV
LIVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEVIN
NHISAASSIAGDVQVIDPVAGNVCFASGTAGWSFTLQSFAKLYGKIHGIPLEANKFASRL
WGDFYYHPDTRTFKKKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTL
SNAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDSAIYK
AMSQCDSSGPLMVNVTKLYPKSDCSVFDVFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMT
VKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATICNVDYDEDVYIFRPLQFN
TLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKD
LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENG
VVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLSAVK
DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA
TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGF
ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRKGM
SEDVSIGKFFDEAMMVELAQQAADLHQQMM
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagcttatacgacgaattcggcaactacatcggacccgaaatcgactccgat
gttgactccgatagggaagaagacaatgacgacgatgacgaccaagacaggctcaccaac
caccgcgacggcgacgcctccgacggcgacgctcccaacaatggctggatcactacctcc
aacgacgtcgacatgttggacaaccaggttgtgctcgcggaggataagaagtactaccct
accgccgaagaggtttatggcgaagacgttgaaaccctagttatggacgaagatgaacaa
tccctagagcaaccaataatcaaacccgttcggaacatcaaattcgaagttggagtgaaa
gattcaacaacatacgtgtcttctcagtttctacttggcctaatgtcgaaccctactctg
gttagaaacgttgcgcttgttgggaacttgcagcacggaaaaacggtgttcatggatatg
cttgtggagcaaacgcatcatatgtgtacgtttgatccgcagagtgagaaacatatgagg
tatactgatactagagttgatgaacaagaaaggaggatttcgattaaagcggttcctatg
tcgcttgtgatggaggatagtaattctaagtcgtatttatgtaacattatggatacacct
ggtcatgtcaatttctctgatgaaatgaccgctgcgttgaggcttgctgatggtgctgtg
ttgattgtggatgctgctgaaggagtcatggttaacacagagagggcgatacgccatgca
acccaggagcgactgcctattgtcgttgtcatcaataaggttgacaggctcataactgaa
cttaaattgcctccaaaagatgcttaccataaaataaggcatacactggaagtgatcaac
aaccatatatctgctgcctcctcaattgctggagatgtccaagttatagacccagttgct
ggaaatgtttgttttgcaagtggtactgcaggatggtcctttacattgcaatcatttgct
aaactatatgggaagatacatggcatccctctggaagctaacaaatttgcttctcgtctt
tggggagacttctattatcatccagataccagaaccttcaaaaagaaacctcctgccagt
ggaggagaacgatcttttgttgagtttgtgctggaaccactctacaagatatatagccaa
gtcattggggaacataagaagagtgtagaaacaactcttgctgaacttggagtcaccctc
agtaatgcagcttatagattgaatgttagacctttgctaaggttggcttgcagctcagtt
tttggttcagcttcgggtttcaccgatatgcttgttcagcatattccttcaccaagagat
gctgcaatcaagaaagttgaccatatatatactgggcccaaagattcagccatctacaaa
gccatgtctcagtgtgattcttctgggcccttaatggttaatgtgaccaaattgtatcca
aaatctgattgcagtgtgtttgatgtttttggtagagtgtatagtggcaagatacagaca
ggacagacagtacgtgttctaggagaagggtactcgccggatgatgaggaggacatgact
gtaaaagaagtgacaaagttgtgggtgtatcaagctagagataggatgccaatagctgag
gcacctcctggttcttgggttctcattgaaggtgtagatgcttccatcatgaaaactgcc
actatttgtaatgtggattatgatgaggatgtatatatattccgacctcttcagttcaat
actctgtcagtggtaaaaacagctactgagccattaaatccaagtgagttgccaaaaatg
gtggagggcttgaggaagataagcaagagttatcctctggcagttactaaagttgaggag
tctggggaacacactatattggggactggtgaactgtacttggattcaattatgaaggat
cttagagagctctattctgaagttgaagtcaaggtggctgatcctgttgtctcgttttgt
gaaactgttgttgaatcttcatcaatgaaatgttttgccgagacaccaaacaagaagaat
aaaataactatgattgccgagccactagaaagaggtctagctgaggacatagaaaatggt
gttgttagcactgactggaatagaaagaaacttggtgaatttttccagacgaagtatgac
tgggatctccttgctgcacggtcaatctgggcatttggccctgataagcaggggccaaat
attctgttagatgacacccttcccactgaagttgacaagaaccttctgagtgctgtaaag
gattccattgttcagggatttcagtggggtgcccgagagggacctctatgtgatgaaccc
atcagaaatgttaaattcaagattgttgatgcaagaattgcccctgaaccacttcatcgg
ggatctggccagatcattccaacagcacgacgagtggcctactcttctttccttatggct
acccccaggcttatggaaccagtatattatgtagagatacaaacacctatagactgtgta
tctgcaatatacactgtgctatctcgtaggcgtggacatgttactgctgatgttcctcaa
ccaggcaccccagcttatattgttaaggcatttttgcccgtgatagaatcttttggtttt
gagacagacttgagataccatacccaaggtcaagcattttgcctctcagtttttgatcat
tgggctattgttcctggagatcctctggacaaaaatattgttttgcgaccacttgaacca
gcaccaatccagcatcttgcccgtgagtttatggtgaaaacaaggcgtagaaaggggatg
agtgaagatgtaagcataggtaagttctttgatgaggctatgatggtggaactggcacag
caggcggcagatcttcatcaacaaatgatgtga
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