Lupinus angustifolius (narrow-leaved blue lupine): 109348019
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Entry
109348019 CDS
T04664
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109348019
03015 mRNA surveillance pathway
109348019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109348019
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109348019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109348019
NCBI-ProteinID:
XP_019443739
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All DBs
Position
LG05:20405421..20411095
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AA seq
418 aa
AA seq
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MVKPGRGRRSPPSGSVSGSSSRSRSRSSSPSSRSRSSSRSRSRSFSSSSPSRSSRSPSRS
PPPQRKKSPAEAARRGRSPPPPPLKRASPPPMKASPLHESLVLHVEKLSRNVNEGHLKEI
FSNFGEVVSVELAMDRAVNLPKGYGYVHFKTREDAEKALLYMDGAQIDGNIVKARFTLPP
RQKVSPPPKAAAIAPKRDALRSDNAGADAEKDGPKRQREPSPRRKPLSPRRRSPVPRRVG
SPRRPDSPRRRADSPVRRRLDSPPYRRGDTPPRRRPISPGRGRSPSPPRRPRSPGRVSPR
RMRGSPIRRRSPPPLRRRSPPRRARSPPRRSPIGRRRSRSPVRRSARSRSRSFSPRRGRP
PVRRGRSSSYSDSPSPRKVSRRTKSRSPRRPLRGRGSSNSSSSSSPLPPPPPPPPRKP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacctgggcgaggtcgtcgttcaccaccatctggttccgtttctggttcatca
tctcgttcccgatctcgatcttcttctccttcctctcgttctcgatcttcttctcgctct
cgttccagatccttttcttcttcctctccatctcgcagttcccgaagccctagccgaagt
cctccgcctcagagaaaaaagagtcctgccgaagcagctaggcgaggtcgatctcctccc
cctcctcctctcaaaagagcttctcctcccccaatgaaggcgtctcctttacatgaatca
cttgttcttcatgtagaaaaactcagcaggaatgtcaatgaaggccatttgaaagaaatt
tttagtaactttggtgaagttgtaagtgtggagttggcaatggatcgagctgttaatctt
cctaaaggatatggatatgtgcatttcaagacaagagaggatgccgaaaaagcattattg
tacatggacggtgcccaaatagatggcaacattgttaaggcaagatttactctaccccca
cgacaaaaagtttcaccacccccaaaggctgctgctattgctccgaagagagatgctctg
aggagtgataatgctggtgcagatgctgaaaaggatgggccaaagcgacaaagagaacca
tctccacggagaaaacctctctcaccgaggaggagatctcctgtgcctcgaagagttgga
tctccaagaagaccagattctcctcgccgtcgtgcagattctcctgttcgtcgtcgatta
gactctcctccctatcgccgtggagatacaccacctaggaggaggcctatatctcctgga
agaggtcgttctccatctccaccaaggcgccctagatctcctggcagagtctcacctaga
aggatgcgtggaagtcccattcgcagacgttctcctcctccattaaggcgccgttcacca
ccgagaagagcccgtagtcctcctagaagatctccaattggccgtagacgtagtcgctct
ccagtacgtaggtctgctcgctcacgttctagatcattctcacctcgaaggggtcgacca
ccggtccgacgtgggaggtcatcatcctactctgattcacctagtccacgcaaggtatct
cggagaacaaagagccgcagtccaagaaggcctttgagaggaagaggcagtagcaacagc
agcagcagcagttcaccactcccaccacctccacctccaccacctcgcaagccatag
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