Lactobacillus apis: DKL56_06615
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Entry
DKL56_06615 CDS
T06844
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lapi
Lactobacillus apis
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DKL56_06615 (rnmV)
Enzymes [BR:
lapi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
DKL56_06615 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Jun
Motif
Other DBs
NCBI-ProteinID:
AWM74192
LinkDB
All DBs
Position
complement(1387752..1388324)
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AA seq
190 aa
AA seq
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MVLTKKQFNAVVVVEGKDDTIRLKQFFPGIETIETNGSDVPPVVLTELKELSKKREIIVL
TDPDLNGERIRRLVTEAVPSAKQAFITRKEGDPHKKGKGNSLGVEHASKQALVRALSDLH
EQQAPSSDISKQAYQKLGLSSGPNSRKLREQVGISLRIGYGNAKQFYNRLCTFGITLKQL
EQAVKEAKNE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaactaaaaaacaatttaatgccgttgtagtggtagaaggtaaagatgataca
attcgcctaaaacagttttttcctggcatcgaaacaattgaaaccaatggctctgatgtg
ccaccggtggtcttgactgagttaaaagaattatcaaagaaacgtgaaataattgtctta
accgacccagatcttaatggtgagagaatccgcagattagttactgaggcggtccctagt
gctaagcaggcctttattacacgcaaagaaggcgatcctcataaaaaaggaaagggcaat
tcactgggagttgagcatgcctcaaagcaggcacttgttagggctttgagcgacttacat
gaacagcaggctccttctagtgatattagcaagcaagcttatcaaaaactgggtttatca
agcgggcccaattcgcgaaaattacgtgagcaagtgggaattagcttgcgtatcggttat
ggcaacgcaaaacagttttacaaccggttatgcacatttggtattacgcttaagcaactt
gagcaggccgttaaggaggcaaaaaatgaataa
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