Lysobacter antibioticus ATCC 29479: GLA29479_2029
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Entry
GLA29479_2029 CDS
T04526
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq00470
D-Amino acid metabolism
laq00550
Peptidoglycan biosynthesis
laq01100
Metabolic pathways
laq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GLA29479_2029 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GLA29479_2029 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GLA29479_2029 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
laq01011
]
GLA29479_2029 (ddlB)
Enzymes [BR:
laq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GLA29479_2029 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
laq01011
]
Precursor biosynthesis
Amino acid ligase
GLA29479_2029 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_5
Glyco_hydro_31_3rd
Motif
Other DBs
NCBI-ProteinID:
ALN62901
LinkDB
All DBs
Position
complement(2222753..2223745)
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AA seq
330 aa
AA seq
DB search
MSPQFAPLRVTDPAVFGRVAVLMGGTSAEREVSLDSGRGVLEALRSRGVDAFAVDGIPAL
METIRSGGVDRVFNILHGNKGGGEDGVLQGVLEALGVPYTGSDVLGSALAMDKIRTKQVW
MSTGLPTPRYKRIAKGDDVHAAAREIGLPVIIKPSSEGSSVGVSRVLKDADIDEAVALAA
RYPGEMLMEQMVIGDELTVAVLVNGEGYSALPSIRIVPKGEWYDYHAKYIADDTQYLCPG
LDGADEAEIRRLAMEAFVAAGCKGWGRVDVMRDRSSGQLYLIEVNTAPGMTSHSLVPKAA
RQVGIEYDELCWRVLEATVVAPPAVGGDAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccgcagttcgcgccgttgcgcgtcaccgacccggccgtgttcggccgcgtcgcc
gtgctcatgggcggcaccagcgccgagcgcgaagtgtcgctggactccgggcgcggcgtg
ctggaagcgctgcgttcgcgcggggtcgatgcgttcgcggtcgacggcatcccggcgctg
atggagaccatccgcagcggcggcgtcgaccgcgtcttcaacatcctccacggcaacaag
ggcggcggcgaagacggtgtgctgcagggcgtgctggaagccctgggcgtgccgtatacc
ggttcggacgtgctcggctcggcgctggcgatggacaagatccgcaccaagcaggtgtgg
atgtcgaccggcctgccgaccccgcgctacaagcgcatcgccaagggcgacgacgtccac
gcggcggcgcgcgagatcggcttgccggtgatcatcaagccctccagcgaaggctccagc
gtcggcgtgtcgcgcgtgctcaaggacgccgacatcgacgaggcggtggccttggccgcg
cgctatccgggcgagatgctgatggagcagatggtgatcggcgacgagctgaccgtggcc
gtgctggtcaacggcgagggctacagcgcgctgccgtcgatccgcatcgtgcccaagggc
gagtggtacgactaccacgccaagtacatcgccgacgacacccagtacctgtgcccgggc
ctggacggcgccgacgaagccgagatccgccggttggcgatggaagccttcgtcgccgcg
ggttgcaagggctggggccgggtcgacgtgatgcgcgaccgcagcagcggccagctgtat
ctgatcgaggtcaacaccgcgccgggcatgaccagccactcgctggtgccgaaggccgcg
cgccaggtcggcatcgagtacgacgagctgtgctggcgcgtgctcgaggcgaccgtggtc
gcgccgcccgccgtaggaggtgacgcggcgtga
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