Lysobacter auxotrophicus: LA521A_00560
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Entry
LA521A_00560 CDS
T09075
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA521A_00560 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_00560 (recD)
Enzymes [BR:
laux01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LA521A_00560 (recD)
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA521A_00560 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
Helicase_RecD
SH3_13
UvrD_C
AAA_22
T2SSE
RecD_N
DEAD
SLFN-g3_helicase
nSTAND3
NTPase_1
CbiQ
Motif
Other DBs
NCBI-ProteinID:
BDU14855
LinkDB
All DBs
Position
62225..64042
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AA seq
605 aa
AA seq
DB search
MSLLDALLRQGALRPVDHALAQSLRRLGREDGDADDRVLVAAALASSAIAHGHAGLDLSR
PELVCDANVEWPDAAQWRDALQASRWVALPSRDAAATQAPLVLEDNLLYLRRYREYERRL
AMNLRRIASASPAKGDLASLAPLFAALFPGARDTDRQARAAALALVRSLLLVTGGPGTGK
TTTITRVLLLLIAQAALDGRPPPRIALAAPTGRAAERMAESLRAAIARLRDIEGIEAAWC
DALPSSASTLHRLLGTIPDSPRFRHDADHPLPFDAVVVDEASMVDLPLMCKLVEAVPDGA
RLILLGDRDQLPSVEAGDVLAAITDAAGEGDALPAELARMLSPLLGALPERDDEGVLAGH
RVQLQRGYRQAQSLELAPLADAMRTGDAERATQLLREGLAGVRFHEDVSDPLSGSSRETL
LAPWRALMSLTDPAQALQQAQALRLLTALREGAQGAAALNQRIEDALAGVQRDPYFHGRL
LLVTENSYRHGLFNGDIGVVQRDAAGVPVAWFAGADGVRGFHPASLPAHSGAFAMTVHKA
QGSEFDTVWLLLPKQDARTLSRELLYTGVTRARRELHVCASEGVLQAALARHAQRVSGLA
ARLRA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcgatgccttgctgcgccagggtgcgttgcgaccggtcgatcacgcgctc
gctcagagcctgcgccgcctcgggcgcgaggacggcgatgcggacgatcgggtgctcgtc
gccgcggcgttagcgtcgtcggcgatcgcgcatgggcatgcgggcctggatctatcgcgt
ccggaactggtgtgcgatgcgaatgtcgaatggcccgacgcggcgcaatggcgcgacgcg
ctgcaggcctcgcgctgggtcgcgctgccttcgcgcgacgccgccgccacgcaggcgccg
ctggtgctggaagacaacctgctttacctgcgtcgataccgcgagtacgaacgccgcctc
gcgatgaacctgcggcggatcgcgtcggcgtcgccggccaagggcgatctggcgtcgctg
gcaccgctgttcgccgcgctgttccccggggcgcgcgacacggaccggcaggcacgcgcc
gccgcgctcgcgctggtgcgttcgctgctgctggtcaccggcggcccgggaaccggcaag
acgaccacgatcacgcgcgtgctgctgttgcttatcgcgcaggccgcgctcgatggccgg
ccgccgccgcgcatcgcgctcgccgcgccgaccggccgcgccgccgagcgcatggccgaa
agcctgcgcgcggcgatcgcgcgcctgcgcgacatcgagggcatcgaggcggcgtggtgc
gatgcactgccatcgtccgcgagcacgctgcaccgcctgctcggcacgattcccgacagc
ccgcgtttccggcacgacgccgatcatccgctgccgttcgacgcggtcgtcgtggacgag
gcgtcgatggtcgacctgccgctgatgtgcaagctcgtcgaagccgtgcccgatggcgcg
cggctgatcctgctcggcgaccgcgaccagttgccgtcggtcgaggccggcgacgtgctc
gccgccatcaccgacgccgcgggcgagggcgacgcgttgccggcggaactcgcgcgcatg
ctgtcgccgctgctgggcgcgttgcccgaacgcgacgacgagggcgtgctcgcgggccac
cgcgtgcagttgcagcgtggctaccggcaggcgcaatcgctggagctggcgccgctcgcc
gatgccatgcgcaccggcgatgcggagcgcgcaacgcaactgctgcgcgaggggcttgcg
ggcgtgaggttccacgaggacgtgtccgatccgttgtcgggttcgtcgcgcgagacgttg
ctcgcgccgtggcgtgccctgatgtcgctgaccgatcccgcgcaggcgttgcagcaggcg
caggcgttgcgactgctcaccgcgttgcgtgaaggcgcgcagggtgcggcggcgttgaac
cagcgcatcgaggacgcgctcgccggcgtgcagcgcgatccgtacttccacggccggctg
ttgctggtcaccgaaaacagctatcgccacggcctgttcaacggcgacatcggcgtggtg
cagcgcgacgcggcaggcgtgccggtcgcgtggttcgccggtgccgatggcgtgcgcggc
ttccatccggcgtcgctaccggcgcacagcggtgcgttcgcgatgacggtacacaaggcg
cagggttcggagttcgacaccgtctggctgctgctgccgaagcaggatgcgcggacgttg
tcgcgtgagctgctctataccggcgtcacgcgcgcgcgccgcgagttgcatgtgtgcgcg
agcgagggcgtgttgcaggcggcgctggcgcggcacgcgcagcgcgtgtccgggctggcg
gcgcgcttgcgggcctag
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