Loxodonta africana (African savanna elephant): 100655410
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Entry
100655410 CDS
T04351
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X2
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100655410 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100655410 (CNOT6)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100655410 (CNOT6)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100655410 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100655410 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
type_II_gspD_N0
LRR_6
Motif
Other DBs
NCBI-GeneID:
100655410
NCBI-ProteinID:
XP_010591610
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTLDILNLYQEPDGTRRLLNYLLDNLAVSTEQPPPRSWIMLQEPDRTRP
TALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEIVSCNADIISLQEVETEQ
YYSFFLVELKERGYSGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQL
AMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWD
PEYSDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYL
STGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFD
FKGIIDYIFYSKPQLNTLGILGPLDHHWLLENNISGCPHPLIPSDHFSLFAQLELLLPFL
PQVNGIHLPGRR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacgattatgtcctct
gaggaggcagcaaatggaaagaaatcacattgggcagagcttgaaataagtgggaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctatcctctaataaaattcgtagtttaccagcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttaccctggatatattgaacctctat
caggaaccagatggcacaagaaggctactgaactatttgcttgataatttggcagtttca
acagaacagccacctccaagatcttggattatgttacaagaaccagacagaacaaggcca
actgccttgttttctgtcatgtgctataatgttctttgtgataaatatgcaacccggcag
ttatacggctactgtccatcatgggcactaaattgggactacaggaaaaaggccattatt
caagaaatcgtgagctgcaatgctgatatcataagtcttcaggaggttgaaacggaacag
tattacagtttttttctggtagaactgaaagaacgtggctatagtggattctttagtcct
aagtctagagctcgaacaatgtcagaacaagaaagaaaacatgttgatggctgtgcaata
ttcttcaagacagaaaaatttactttggttcagaaacacactgttgaatttaatcagcta
gcaatggcaaattcagaagggtctgaagctatgctgaacagagtcatgacaaaagataac
attggagttgcagtactgctagaacttcgaaaggaattgattgaaatgtcatccggaaag
ccacatcttggaacagaaaaacaacttattcttgtggctaacgctcatatgcattgggac
cctgaatattctgatgtgaagctggtacaaactatgatgttcctctcagaagtaaagaac
attattgataaagcctctcgaagtctcaaatccagtgtattgggagaatttggaactatt
ccacttgtcttatgtgcagatcttaattctttgccagactctggtgttgtggaatatttg
agcactggtggagtagaaacaaatcataaagactttaaggaactgagatataatgaaagt
cttacaaacttcagctgtaacgggaagaatggaacaaccaatggaaggatcactcatggt
tttaaattaaagagtgcctacgagaatggcctgatgccttacacaaattatacatttgat
ttcaagggtataattgactacatcttctattctaaacctcaactgaacactttaggcatc
ctgggacctctggaccaccattggctacttgagaacaacatcagcggctgtccacaccca
ctcatcccttctgaccatttctcactttttgcacaactggagcttttactgcctttccta
ccccaagtcaatggcattcaccttcctggcaggaggtag
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