Loxodonta africana (African savanna elephant): 100662699
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Entry
100662699 CDS
T04351
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
KO
K08525
retinoid X receptor beta
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03320
PPAR signaling pathway
lav04659
Th17 cell differentiation
lav04919
Thyroid hormone signaling pathway
lav04920
Adipocytokine signaling pathway
lav04928
Parathyroid hormone synthesis, secretion and action
lav05200
Pathways in cancer
lav05202
Transcriptional misregulation in cancer
lav05207
Chemical carcinogenesis - receptor activation
lav05216
Thyroid cancer
lav05222
Small cell lung cancer
lav05223
Non-small cell lung cancer
lav05226
Gastric cancer
lav05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100662699 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100662699 (RXRB)
03320 PPAR signaling pathway
100662699 (RXRB)
04919 Thyroid hormone signaling pathway
100662699 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
100662699 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100662699 (RXRB)
05202 Transcriptional misregulation in cancer
100662699 (RXRB)
05207 Chemical carcinogenesis - receptor activation
100662699 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
100662699 (RXRB)
05216 Thyroid cancer
100662699 (RXRB)
05222 Small cell lung cancer
100662699 (RXRB)
05223 Non-small cell lung cancer
100662699 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100662699 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100662699 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lav03310
]
100662699 (RXRB)
Transcription factors [BR:
lav03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100662699 (RXRB)
Nuclear receptors [BR:
lav03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100662699 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
100662699
NCBI-ProteinID:
XP_003421092
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MSWTARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPHGAPPPSPPGPPLPPSAAPSLGGTGAPPQ
PPLPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
ERILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggactgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagagatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggcagcgggagaacaacaaaccccg
gagccggaaccgggggaggctggacgggacgggatgggcgacagcgggcgggactctcga
agcccagacagctcctccccaaatccccttccccacggagcccctcctccttctcctcct
gggccacccctgcccccttcagcagccccatcccttggaggcactggggctccaccccaa
cccccgctgccaccacctccactgggatcccccttcccagtcatcagctcttccatgggg
tctcccggtctgccccctccagctcccccaggattctccgggcctgtgagcagcccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacgtctgtgtgcaatctgcggggacagaagctcaggcaaacactatggggtgtacagc
tgtgagggttgcaagggcttcttcaagcgcaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcacagtggacaagcgccagcggaaccgctgtcagtactgccgc
tatcagaagtgcctggccacaggcatgaagagggaggcggtacaggaggagcgtcagcgg
gggaaggacaaggatggggacggagagggggctgggggagcccccgaggagatgcctgtg
gagaggatcctggaggcagagcttgctgtggaacagaagagtgaccagggcgttgagggt
cctgggggaactgggggtagtggcagcagtccaaatgaccctgtgacaaacatctgtcag
gcagctgacaaacagctcttcacacttgttgagtgggcgaagaggattccacacttttcc
tccttgcctctggatgaccaggtcattttgctacgggcagggtggaacgagctcctcatt
gcctccttctcccatcgatccattgatgtccgagatggcatcctccttgccacaggtctt
catgtgcaccgcaattcagcccattctgcaggcgtgggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctcttcaatccagatgccaagggcctctccaaccccagcgaggtggag
gtcctgcgggagaaagtatatgcgtcactggagacctactgcaaacagaagtaccctgag
cagcagggacggtttgccaagctgctgctacgtcttcctgccctccggtccattggcctc
aagtgtctagagcatctgtttttcttcaagctcattggtgacacccccattgataccttc
ctcatggagatgcttgaggctccccaccagctggcctga
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