Loxodonta africana (African savanna elephant): 100664772
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Entry
100664772 CDS
T04351
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lav01002
]
100664772 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100664772 (USP42)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100664772 (USP42)
Peptidases and inhibitors [BR:
lav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100664772 (USP42)
Ubiquitin system [BR:
lav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100664772 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100664772
NCBI-ProteinID:
XP_010594578
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MTIVDKASESSEPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPDKSKPSPQKDQVLGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQHTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSTHSPGQSSPRPVISQRVVNNKQAASGFIGPQLPSHVIKNPPHLNGTGPLKETPSSS
MSSPNGNSSVNRASPVNASTSVQNWSVNRSSVIPEHPKKQKITISIHNKLPVRQSQSQPN
LHNNSLENSSKPAPSSTITNSSAIQSTSNTSPVAVSSKVTKQITPGESCPKPVMNGKSKL
NSSVLVPYGAESSEESDEESKGLGKENGLGTTKSSHSPGQDAEDEASQHELQAPITLNGA
NSTDSDPKENGLPFDGASCQVQPAAHSENPFSKANGLPVKLISAPLPPLPEDKILETFKL
SHKAKGSAEETSATGTEKNPKEDREAEPEAARSTLDPCENLETVSSLSSKLKKALLPSEP
SVKSTKEEASENGCTEPAESLPSTNSLCDANQSTLGDDPLSKRCDPGNLTSDQIKPSQDT
NGTLIESPQGRASVEAAEKVAPAPSVNSDGECEHKLLVYVSREKCRELEDLPKSSGVSTG
ELPSPQLGPITENHSDGAPEQSNGERCEENKVGQKVQDRSPVKEKISSLRKVDRGHYRNR
RERSSSSERARESRSKTEDRYHKQRHPYIRERPKQERHKPEHCNGSQQHPAHGERGSPSE
HHSLGRYSHHHSRNRSGSDQEWSRYHHSESEHCWGREKYYPDKTRWDKCRYYHDRYAPYT
AWEGREWKPFHSDRDYDKAGQYSNRPYKDYYKGRKGYELAAKDKDRHHFSSPRAGPPHSL
PLYPEKYPHEKIALVAEDISCHLSDRFHEHDNVKSRKRRYGSVEMNDSNVERKARRSLQK
ESFEEPKVKKHKKSKKKKKSKDKHRDRDSRHQQDSDLSVAYSDADLHRHKKKKKKKKRHS
RKSEDFIKDSVLHLPKATSYETVDHIRRAEGGFPLTDGQPLEGIGPCREKTKHLRMESRG
DKCHLSECGQGD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagaaccatcagcctatcagaatcagcct
ggcagttctgaagcagtctcacctggagacatggatgcaggctctgccagctggggtgct
gtgtcttcgttaaatgatgtctcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatccgtacctgataaatcaaagccatcaccacaaaaggatcaa
gtcctaggtgatggcattgctcctccacaaaaagttctcttcccatctgagaagatctgc
cttaagtggcaacagactcatagagttggagccgggctccagaatttgggcaatacctgt
tttgccaatgcagccttgcagtgtttaacttacacaccgcctctcgccaattacatgcta
tcacatgaacactccaagacatgtcatgcagaaggattttgtatgatgtgtaccatgcaa
gcgcacattactcaggcactcagcaatcctggggatgttattaaaccaatgtttgtcatc
aatgagatgcggaggatagctaggcatttccgttttgggaaccaagaagacgcccatgaa
tttcttcagcacactgtggatgctatgcaaaaagcatgcttgaatgggagcaataaatta
gacagacacacgcaggcgaccactcttgtttgtcagatatttggaggatacctgagatct
cgagtcaaatgtttaaattgcaagggtgtttcagatacttttgacccgtacctcgatata
acgttggagataaaggctgctcagagtgtcaacaaggcactggaacagttcgtgaagccg
gaacagctcgatggagaaaactcctacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggtttactatacatagatcttctaacgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggacgtgaaatatcctgaatatcttgatatt
cgaccgtacatgtctcaaccaaacggggaaccgattatttatgtcctatacgcagtgcta
gtacacaccggtttcaactgccacgctggccattacttctgctacataaaagctagcaat
ggcctctggtatcaaatgaatgattccatcgtatctaccagtgatatcagatcggtactc
agtcagcaagcttatgtcctcttttatatcaggtcccatgatgtgaagaatggaggtgaa
cttactcattccacccacagcccgggccagtcttccccccgaccggtcatcagtcagcgg
gttgtcaacaataaacaggctgcgtcagggttcatcggaccacagcttccttctcatgtg
ataaagaatccacctcacttaaatgggactggacctttgaaagaaacaccaagcagttcc
atgtcaagtcctaatggtaattccagtgtcaacagggctagtcctgttaatgcttcaaca
tctgttcaaaactggtcagttaacaggtcctcagttataccagaacatcccaagaaacaa
aaaattactatcagtattcacaacaagttgcctgttcgccaaagtcagtctcaacctaac
cttcataacaactctttggagaactcttccaagcctgctccctcttctaccattaccaac
tcttctgcaatacagtctacctcgaacacatctccagtggcagtttctagtaaagtaaca
aaacagatcacccctggtgaatcttgtcccaagcccgtgatgaatggcaagtccaagctg
aactcaagtgtgctggtcccctatggcgctgagtcgtctgaagagtctgacgaggagtcc
aaggggctaggcaaagaaaatggtcttggtacgaccaagagctctcattctcctggtcaa
gatgctgaggacgaagcttcccagcatgaacttcaagcgcctattaccctaaatggtgct
aacagtacggacagtgacccgaaggaaaacggtctgccctttgacggtgccagctgccaa
gtccagcctgctgcacactcagaaaaccccttctctaaggccaatggcctccctgtaaag
ttgatctctgcgcctttgccacccctcccagaagacaaaatcctggagaccttcaaactt
agccacaaagcaaaaggctcagcggaagaaacaagcgcaactggaacagagaagaacccc
aaagaggatcgcgaagccgaaccagaggctgccaggagcactctggatccctgcgagaac
ctggagacagtttcaagtctcagcagcaagttaaagaaggcgttgcttccctctgagccc
agtgtcaaatctaccaaagaagaagcctccgaaaacggttgcacagaacccgctgagtct
ttgcccagcaccaacagtctctgtgatgccaaccagagtaccttaggggatgatcccctc
tctaaacggtgtgaccctgggaatttaaccagcgatcagatcaaaccatcacaggataca
aatgggacgttaatagagagtccacagggcagagcatcggtggaagcagcggagaaggtg
gctccagctccctcagtaaactcagatggtgaatgtgagcataaactcttggtttacgtc
agtagggagaaatgccgagaactggaggaccttcctaaaagctcaggcgtgtccacaggt
gagctgccctctcctcagttaggcccgatcacagaaaatcactcagatggggcccctgag
caaagtaatggtgagagatgcgaagaaaataaggtcgggcagaaagttcaggatcgttct
ccagtcaaggaaaaaatcagcagcctcaggaaggtcgatcgaggacattaccggaaccga
cgagagcgttcctccagcagcgagcgcgcgagggaaagcaggagcaagaccgaggatcgt
taccacaagcagcggcacccctacatccgggagcggcccaagcaggagcgccacaagcct
gagcactgcaacgggagtcagcagcacccggctcacggcgagcggggcagccccagcgag
caccactctctgggccggtacagccaccaccactctcggaaccggagcgggtcagaccag
gaatggagccggtaccaccattcagaaagtgaacactgctggggccgggagaagtactac
cctgacaaaacacgatgggacaagtgtcgctactaccatgacagatacgccccttacacg
gcctgggagggcagggagtggaagcctttccacagcgaccgggactacgacaaagcgggt
cagtacagtaaccggccatacaaggactactataagggcaggaagggctatgagctggct
gctaaagacaaggaccggcaccacttcagcagccccagggcaggcccaccccactcgctt
cctctgtacccggagaaatacccccacgagaaaattgcacttgtagctgaagacatcagt
tgtcacctatccgatcgatttcatgaacacgataacgtaaagtcacggaaacggagatat
ggtagtgtagaaatgaatgacagcaacgtagaaaggaaggcccggagaagcttacagaaa
gagtccttcgaggagcctaaagtgaaaaagcacaaaaagtcaaagaagaaaaagaaatcc
aaagacaaacaccgagatcgggactccaggcatcagcaggattcagacctttcagttgcc
tactctgatgctgacctccacagacacaaaaaaaagaagaagaaaaagaagagacattca
agaaaatcagaggactttattaaagattcagtactacacttacccaaggccactagctat
gagactgttgaccatatccgtcgagccgagggcggctttcctctcaccgatggccagcct
ctagaaggcatcggaccttgccgcgagaaaacaaaacatctaaggatggaaagcaggggt
gacaagtgtcatctctctgagtgtggccagggtgattga
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integrated database retrieval system
