Loxodonta africana (African savanna elephant): 100666339
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Entry
100666339 CDS
T04351
Symbol
COLEC12
Name
(RefSeq) collectin-12
KO
K10062
collectin sub-family member 12
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100666339 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100666339 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lav04091
]
100666339 (COLEC12)
Membrane trafficking [BR:
lav04131
]
Endocytosis
Phagocytosis
Opsonins
100666339 (COLEC12)
Lectins [BR:
lav04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Scavenger receptor with a CTLD (SRCL)
100666339 (COLEC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
Collagen
Filament
KxDL
Fez1
SepF
MscS_porin
Alpha-2-MRAP_C
Motif
Other DBs
NCBI-GeneID:
100666339
NCBI-ProteinID:
XP_010585424
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYVLCALLTITVAILGYK
VVEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQ
QLREITEKTSKNKDTLEKLQASGEALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQNQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNI
TIVSQANEQNLKDLQDLHKDAENRTTIKFSQLEERFQLFETDIVNIISNISYTAHHLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDMMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPVGPAGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGLPGPKDPPVLSRPRRSCLPHWKNFTDKC
YYFSVEKEIFDDAKLFCEDKSSHLVYINTREEQQWIKKQIVGKDSHWIGLTDSEHENDWK
WLDGTSPEYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDINNFICERVRETVL
PSAL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgactttgcagaggaggaggaggtgcagtccttcggttacaagaggtttggt
attcaggaaggaacacagtgtaccaaatgtaaaaataactgggcactgaagttttcgatc
atattactatatgttttatgtgccttgctaacaatcacagtagccattttgggatacaaa
gttgtagagaaaatggacaatgtcacaggtggcatggagacatctcgccaaacctatgat
gataaactcacagcagtggaaagcgacctgaaaaaattaggggaccaaactgggaagaaa
gcgataagcaccaactcagaactttccaccttcagatcagacattctggatctacgtcaa
caacttcgtgagatcacagaaaaaaccagcaagaacaaagatacattggagaagttacag
gcaagtggggaggcactggtggacaggcagagtcaactaaaagaaaccttggagaataac
tccttcctcatcaccactgtaaacaaaaccctgcaggcatataatggctatgtcactaat
ctgcaacaagataccagtgtgctccaaggcaatctacagaaccaaatgtattctcataac
gtggtcattatgaacctcaacaacctgaacctgacccaggtacagcagaggaacctaatc
actaatctgcagcggtctgtggatgacaccagccaggctatccagcgaatcaagaacgac
ttccaaaatctgcagcaggttttccttcaagccaagaaggacactgattggttgaaggag
aaagtgcaaagcttgcagactctggctgccaacaattctgccttggccaaagccaacaat
gacaccctggaggacatgaacagccagctcagctcattcacaggtcagatggacaacatc
accattgtctcacaagccaacgagcagaacctgaaagacctgcaggacttacacaaggat
gcggagaacaggacaaccataaagttcagccaactggaggagcgcttccagctcttcgaa
acggatattgtgaacattattagcaacatcagttacacagcccaccacctgcggacgctg
accagcaacctgaatgaagtcaggaccacttgcacggataccctaaccaaacacacggat
gatctgacctccttgaataatacattggccaacatccgtttggattctgtttctctcagg
atgcaacaagatatgatgaggtcaaggttagacactgaagtggccaacttatcagtaatt
atggaagaaatgaagttggtggactccaagcatggtcagctcatcaagaattttacaata
ctacaaggtcctcctggccccaggggtcccaaaggtgacagaggatcccagggaccccct
ggcccaactggcaacaaaggacagaaaggagagaagggggagcctggtccgccaggccca
gctggcgagagaggcccagtcggacctgccggcccccctggagagcgcggcgggaaaggc
tccaagggctcacagggccccaaagggtcccgcgggtcccccgggaagcccggcccccag
ggccccagtggggatccaggccccccaggcccaccaggcaaggacggactccctggcccc
cagggccctcctggtttccagggcctgcagggcaccgtgggggagcctggggtgcctgga
cccagaggactgccaggcttgccgggggtgcctggtctgcccggccctaaagatccccct
gtactctccaggcccagaagaagttgccttcctcactggaagaacttcacagacaaatgc
tactacttttcggttgagaaagaaatttttgatgatgccaaacttttttgtgaagacaag
tcttcgcatctcgtctacataaacacgagagaggaacagcaatggataaaaaagcagata
gtggggaaagatagccactggattggcctcacggactcagagcatgaaaatgactggaag
tggctagacgggacgtctccagagtataaaaattggaaagctggacagccagataactgg
ggccatggtcatgggccaggagaagactgtgctgggttgatttatgctgggcagtggaac
gatttccagtgtgaagacatcaataacttcatttgcgaaagagtcagggagacagtgcta
ccatctgcattataa
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