Loxodonta africana (African savanna elephant): 100666529
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Entry
100666529 CDS
T04351
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav02010
ABC transporters
lav04148
Efferocytosis
lav04975
Fat digestion and absorption
lav04979
Cholesterol metabolism
lav05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100666529 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100666529 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100666529 (ABCA1)
04979 Cholesterol metabolism
100666529 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100666529 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lav02000
]
100666529 (ABCA1)
Transporters [BR:
lav02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100666529 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
100666529
NCBI-ProteinID:
XP_003407869
UniProt:
G3TFC5
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILMSVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SMKDIHKVLRTLQQFENSSSSLTLQDFLVDNETFSGFLHHNLSLPRPTVDKMMGADVRLH
KVFLHGYQLHLTNLCNGSKLGEVIQLGDQEVSKLCNLPREKLDAAEQVLRSNMDILKPIL
AGLNSTSPFLSKELAEATKTLLDSLGTLAQELFSMRSWSDMRQEVMFLTNVNSSSSATQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPNTTATRQVMAEVNKTFQELAVFHHLEGMWEELS
PKIWTFVESSQEMDLVRTLLDSRGSDHFWEERLDGSGWTPQDVAAFLAKHPEDVQAITGS
VYTWREAFNETNQAIKTISRFMDCVNLNKLEPIATEVQLINKSMELLDERKFWAGIVFTG
INPNSDELPYHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFDDMRYIWGGFTYLQDVV
EQAIIRVLTGTENKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSASLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTFFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKVFAS
LLSPVAFGFGCEYFALFEEQGTGVQWDNLFESPVEGDGFNLTTSVSIMLFDTFLYGVMTW
YIEAVFPGQYGIPKPWYFPCTKSYWFGEESNEKSHPCSSQKGVSEICMEEEPTHLKLGVS
IQNLVKVYRNGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYACLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDAVDPTDSDIDPESRETDLLSGVDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDLATQELLNALTKDPGFGTRCMEGNPIPDMPCLVGEEEWTTAP
VPQTIMDLFQKGNWTMENPSPACQCSNDKIKKMLPVCPPGAGGLPPPQRKQSSADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQGLPPSEEVNDAIKQVKK
HLKLTKDSSADQFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANVQK
GENRRKYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLSNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLLKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSRKQLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggcctcagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctatttatcttcctgatcctgatg
tctgttcggctaagctacccaccctacgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccgtgggttcaggggattatctgtaatgccaacaatccc
tgtttccgttatccgactcctggtgaggctcctggggttgttggaaactttaacaaatcc
atagtgtctcgcctattctcagatgctcggagactacttttatatagccagaaagacacc
agcatgaaggacatacacaaagttctgagaacattacagcagttcgagaattccagctca
agtttgacgcttcaggacttccttgtggacaatgaaaccttctctggattcctgcatcac
aacctctctctgccaaggccgactgtggacaagatgatgggggctgatgtcagactccac
aaggtatttttgcatgggtaccagttacatttgaccaacctgtgcaatggatcaaaatta
ggagaagtgattcaactaggtgaccaagaagtttccaagctttgcaacctgccaagggag
aaactagatgctgcagagcaagtacttcgttccaacatggacatcctgaagcccatcctg
gcgggcctaaactccacatctccgttcctgagcaaggagctggctgaagccacaaaaacg
ttgctggatagccttgggaccctggcccaagagctgttcagcatgaggagttggagtgac
atgcggcaggaggtgatgtttttgaccaatgtgaacagctccagctccgctacccagata
taccaggcagtgtcccgcattgtctgtggccatcccgagggtgggggcctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctctttgggggcaatggcactgag
gaagatgctggcaccttctatgacaattctacaaccccttattgcaatgatttgatgaag
aatttggagtctagtcctctttcccgcattatctggaaagctctcaagcctctgcttgta
ggaaagatcctgtatacacctaacactacggccacgaggcaggttatggctgaggtgaac
aagaccttccaggagctggctgtgttccaccatctggaaggcatgtgggaagaactcagc
cccaagatctggaccttcgtggagagcagccaagaaatggaccttgtccggacattgttg
gacagcagaggcagtgaccacttttgggaagagcggttggatggctcaggctggacaccc
caggacgttgcggcatttctggccaagcacccagaggatgtccaggccattactggctct
gtgtatacctggagagaagctttcaatgagacgaaccaggcaataaagaccatatctcgc
ttcatggactgtgtcaaccttaacaaactggaaccaatagcaacagaagtccagctcatc
aacaagtccatggagcttctggatgagaggaagttctgggctggtattgtgttcactgga
attaatcccaacagtgatgagcttccctatcatgtcaagtacaagattcgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggacccgggtcctcgggct
gacccctttgatgatatgcggtacatctggggtggcttcacctacttgcaggacgtggtg
gagcaggccatcatcagggtgctgacgggcactgagaataaaaccggtgtctacatacag
cagatgccctacccatgttatgttgatgacatcttcctgcgggtgatgagccggtccatg
cccctcttcatgacgctggcctggatatactctgtggctgtgatcatcaagggcattgtg
tacgagaaggaggcgcggctgaaggagaccatgcggatcatgggcctggacaatggcatc
ctctggtttagctggttcatcagcagccttatccctctgcttgtgagcgccagcctactg
gtggtcatcctgaagttaggaaacttgctgccctatagcgaccccagtgtggtgtttgta
ttcctctctgtgtttgccgtggtgaccatcctgcagtgcttcctgataagcacgttcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcatcctgtacctgccc
tacgtcctgtgtgtggcatggcaggactacgtgggcttcaccctcaaggtctttgcaagc
ctactgtctcctgtggcttttgggtttggctgtgagtacttcgcccttttcgaggagcag
ggcactggcgtgcagtgggacaacctgttcgagagccctgtggagggagatggcttcaac
ctcactacctcagtctccataatgctgtttgacactttcctctatggggtgatgacgtgg
tacattgaggctgtctttccaggccagtatggaattcccaagccctggtattttccttgt
actaagtcctattggtttggtgaggaaagtaatgagaagagccatccctgttccagccag
aagggagtatcagaaatctgtatggaggaggagcccactcacctgaagctgggtgtgtcc
attcagaacctggtgaaggtttaccgaaatggcatgaaggtggcagttgatggcctggca
ctgaatttttatgaaggccagatcacctccttcctgggccacaatggagcgggaaagacc
accaccatgtccatcctgactgggttgttccctcccacctcgggcaccgcctatatcctg
gggaaagacattcgctcagagatgagcacgatccggcagaacctgggggtctgtccccag
cataatgtgctgtttgacatgctgactgtcgaagagcacatctggttctatgcctgcctg
aaaggcctctctgagaagcacgtgaaagcagagatggagcagatggctctggatgtcggc
ctgcctcccagcaagctaaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggccttcgtggggggatccaaggttgtcattctggacgagcccaca
gctggtgtggacccttactcccgcagggggatatgggagctgctgctaaagtatcgacaa
ggccgcaccattattctctccacacaccacatggatgaagcagacattctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctctctgttcctgaagaac
caactgggaacaggctactacctcaccctggtcaagaaggatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacactgaccatcgatgtc
tctgctatctccaacctcatcaggaagcatgtggctgaggcacggctggtggaagacatt
gggcatgagctgacctacgtgctgccctatgaagctgctagggagggggcctttgtggaa
ctcttccatgagattgatgaccggctctcagatctgggcatctctagttacggcatctca
gagaccaccctggaagaaatattcctcaaagtggctgaagagagcggggttgatgctgag
acctcagatggcaccttgccagcaagacggaacagacgggcctttggggacaggcagagc
tgtcttcgcccattcacagaagatgatgccgtagatcccactgattctgacatagaccca
gagtccagagagacagacctgctcagtggagtggatggcaaaggctcctaccaagtgaag
ggctggaaactcacacagcaacagttcgtggcccttttgtggaagaggctactgattgcc
aggaggagccggaagggattctttgctcagattgtgctacccgctgtgtttgtctgcatc
gccttggtgttcagcttgattgtgccaccctttggcaaataccccagcctggaacttcaa
ccctggatgtacaatgagcaatacacgtttgtcagtaacgatgctcctgaggacttggcc
acccaggaactcttgaatgccctcactaaagaccctggctttggaacccgatgtatggaa
ggaaatcccatcccagatatgccctgcttggtgggggaggaggagtggaccaccgcccca
gttccccagaccatcatggacctcttccaaaaggggaactggacgatggagaacccttca
cctgcctgccagtgtagcaatgacaaaatcaagaagatgctgcccgtgtgtcccccaggg
gcaggggggctgcctcctccacaaagaaaacagagcagtgcggacatccttcagaacctg
acgggaagaaacatttcagattatctggtgaagacatatgtgcagatcatagccaaaagc
ttaaaaaacaagatctgggtgaatgaatttaggtatggtggattttccctgggtgccagt
aattctcaaggacttcctccaagtgaagaagttaatgatgccatcaagcaagtgaagaaa
cacttgaagctgaccaaggacagttctgcagatcaatttcttagcagcttgggaaggttt
atgactggactggacaccaaaaataacgtcaaggtgtggtttaacaacaaaggctggcat
gccatcagctctttcctgaatgtcatcaacaatgccattctccgggccaacgtgcagaag
ggagagaaccggagaaaatatgggattactgctttcaatcaccccctgaatctcaccaag
cagcagctctcagaagtggctctaatgaccacgtcagtggatgtccttgtttccatctgt
gtcatcttcgcgatgtcctttgtgccggccagctttgtcgtgttcctgattcaggagcgg
gtcagcaaagcaaagcacctgcagttcatcagtggagtgaagccggtcatctactggctc
tccaattttgtctgggatatgtgcaactatgtggtccctgccacgctggtcattatcatc
ttcatctgtttccagcagaagtcctacgtgtcctccaccaacctgcctgtgctagccctt
ctacttttgctgtatgggtggtcgatcacacctctcatgtacccagcctccttcgtgttc
aagatacctagcacagcctatgtggtcctcaccagcgtaaacctcttcattgggatcaat
ggcagtgttgccacttttgtactggagctcttcaccaacaataaactgagtaacatcaac
gacatcctgaagtctgtgttcttgatcttccctcatttttgcctagggcgggggctcatt
gacatggtgaaaaaccaggcaatggctgatgccctggaaaggtttggggagaaccgcttt
gtctcaccactttcttgggacttagtgggacggaacctcttcgccatggctgtggaaggg
gtggtgttcttcctcattactgttctgatccagtacagattcttcatcaggcccagacct
gtaaatgcaaagcttcctcctctgaatgatgaggatgaagatgtgaggcgggaaagacag
aggattcttgatggtggaggacagaatgacatcttggaaatcaaagaattgactaagatc
tatagaaggaagaggaagcctgcagttgacaggatctgcattggcattccccctggcgag
tgctttggacttctgggagttaacggggctgggaaatcatcaactttcaagatgttaact
ggagataccactgttaccagaggagatgcttttcttaacaaaaatagtatcttatcaaac
atccatgaagtacatcagaacatgggctattgccctcagtttgatgccatcacggagcta
ctgactgggagagaacatgtggagttctttgctctcttgagaggagtcccagagaaggaa
gttggcaaggttggtgaatgggcaattcggaaactgggccttctgaaatacggagaaaaa
tatgctggtaactacagtggaggcaacaagcgcaagctctccacagccatggctttgatc
ggtgggcctcctgtggtgtttctggatgaacccaccacaggcatggatcccaaagcccgg
agatttttgtggaattgtgccctaagtattgtcaaggaggggagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgtactaggatggcaattatggtcaatggg
aaattcaggtgtcttggcagtgttcagcatctgaaaaacaggtttggagatggatataca
atcgttgtacgaatagcagggtcaaaccctgacctgaaacctgtccaggaattctttgga
ctcgcctttccaggaagtgtccttaaagagaaacatcgaaatatgctgcaataccagctt
ccatcttcattatcttctctggccaggatattcagcatcctttcccagagcagaaagcaa
ctccatatagaagactactctgtttctcagacgacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtggatgttgcagttcttacgtcttttctgcaggatgagaaagtcaaagaaagttat
gtatga
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integrated database retrieval system