Loxodonta africana (African savanna elephant): 100670036
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Entry
100670036 CDS
T04351
Symbol
SLIT1
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein
KO
K06838
slit 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100670036 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100670036 (SLIT1)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100670036 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
EGF
LRR_1
Laminin_G_2
LRRCT
hEGF
Laminin_G_1
LRR_9
EGF_3
EGF_2
C8A_B_C6_EGF-like
Motif
Other DBs
NCBI-GeneID:
100670036
NCBI-ProteinID:
XP_023402630
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MVLMPWKGPLAWLVRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RSTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LHMLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCTCSNGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQGL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCATPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASVVDCASLKLTKIPERIPQ
STAELRLNNNEISILEATGIFKKLTHLKKINLSNNKLSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDSLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTISPGAFDTL
QSLSTLNLLANPFNCNCRLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAYPDFRCE
EGQEEGGCLPRPQCPQECTCLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDISTXPXGIFADVTPXSHLAIGANPLYCDCHLRWLSGWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPTLAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRN
CEVSLDGCISGPCENGGTCLAQEGDDASFTCSCPTGFEGPTCGVNTDDCVEHACANGGSC
VDGVGNYTCQCPLQYVGKACEQLVDFCSPDLNPCQHDAQCVGTPDGPRCECMPGYTGHNC
SENQDDCGNHRCQNGAQCVDEVNSYSCLCAEGYSGQLCEIPPRPPAPRSPCEGTECQNGA
NCVDQGSQPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFDKHYTLNSEAPLYVGGEDLAQGEVTAIPGWDLFCPLA
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgccctggaaggggcccttggcgtggctcgtccggcccgagctctggctg
ctgctgtgggcagctgcgtggcgcctgggtgccacggcgtgccccgccctctgcacctgc
actggcaccacggtggactgccacggcacggggcttcaggccatccctaagaacatccca
cggagcaccgagcgcctggaactcaatggcaacaatatcactcggatccataagaatgac
tttgcagggctcaagcagctgcgggtgctgcagctgatggagaaccagattggagtggtg
gagcggggggctttcgatgacatgaaggaactggagaggctacgactgaaccggaaccaa
ctgcacatgttaccagaactgctgtttcagaataaccaggctctgtcgagactggacctg
agtgaaaacaccatccaggccatccccaggaaagctttccgaggggctacagacctcaaa
aatttacagctggacaagaaccagatcagctgcattgaggaaggggctttccgggctctg
cgggggctggaggtgctgaccctgaacaacaacaacatcaccaccattcctgtgtccagc
ttcaaccacatgcccaagctccgaaccttccgcctgcactccaaccatctgttctgtgac
tgccacctggcctggctctcgcagtggctgaggcagcggccaaccatcgggctcttcacc
cagtgctcaggccccgccagcctgcgtggcctcaacgtggctgaggtccagaagagtgag
ttcagctgctcaggccagggagaggcggggcgtgtgccctcctgcaccctctcctccggc
tcctgcccggccatgtgcacctgcagcaacggcatcgtggactgtcgcggcaaaggcctc
accgccatccccgccaacctgcccgagaccatgacggagatacgcctggagctcaatggg
atcaagtccatccccccgggtgccttttctccgtaccgaaagctgcggaggatagacctc
agcaacaaccagatcgcggagatagcgcctgatgccttccagggcctccgctccctaaac
tcactggtcctctatgggaacaagatcacagacctcccccggggtgtgtttggaggcctg
tacaccctacagcttctgcttctgaacgccaacaagatcaactgcatccggcctgatgcc
ttccaggacctgcagaacctgtcactgctctccctgtatgacaacaagatccagggtctg
gccaagggcaccttcacctccctgcgggccatccagaccctgcatctagcccagaaccct
ttcatctgtgactgtaacctcaagtggctggcagacttcctgcgcaccaaccccattgag
acgagcggcgcccggtgcgccactccccggcgcctagccaacaaacgcatcgggcagatc
aagagcaagaagttccggtgctcagctaaggagcagtacttcattccaggcactgaggac
taccagctgaacagtgagtgtaacagcgacgtggtctgcccccacaagtgccgctgcgag
gccagtgtggtggattgtgccagcctgaagctcacgaagatccctgagcgcatcccgcag
tccacagctgagttacgtttgaacaacaatgaaatttccatcctggaggccactgggata
tttaaaaaacttacacatctgaagaaaatcaacctgagcaacaacaagttgtcagaaatt
gaagacggggccttcgagggtgctgcctctgtgagtgagctgcacctgaccgccaaccag
ctggagtccatccggagtggcatgtttcggggtctggacagcttgaggaccctgatgctg
aggaacaaccggatcagctgcatccacaacgacagcttcacaggtctgcgcaacgtccgg
ctcctctcgctgtatgacaaccagatcaccaccatctcccccggagccttcgacaccctc
cagtccctctccacgctaaaccttctggccaaccctttcaactgtaactgccggctggct
tggcttggtgactggctgcggaagaggaagattgtgaccgggaacccacgatgtcagaac
ccagatttcttgcggcagatccccttgcaggatgtggcctacccggacttcaggtgtgag
gaagggcaagaggaggggggctgcctgccccgcccgcagtgcccccaggagtgcacctgt
ctggacactgtggtccgatgcagcaacaagcacctccgggccctgcccaagggcatcccc
aagaatgtcacagagctctatttggacgggaatcagtttacactggtcccaggacagctg
tccaccttcaagtacctacagcttgtggatctcagtaacaacaagatcagctccttaagc
aattcctccttcaccaacatgagccagctgaccactctgatcctcagctataacgccctc
cagtgcatccctcccctggccttccaggggctccgctccctgcgcctgctgtccctccat
ggcaacgatatctccaccnctccgtgagggatcttcgcagacgtgactccctgaagccat
ctggccattggtgccaaccccctgtactgtgactgccacctccgctggctgtctggctgg
gtgaagacgggctataaggagccgggcattgcccgctgtgctgggcccccagacatggag
ggcaagctgctcctcaccacaccggccaagaagtttgaatgccaaggtccccccactctg
gctgtccaggccaagtgtgatccctgcttgtccagcccatgccagaaccagggcacctgc
cataatgatccccttgaggtgtacaggtgtgcctgccccagcggctacaagggccgcaac
tgtgaggtatccctggatggctgtataagcggcccctgtgaaaatggtgggacctgcctt
gcacaggagggtgacgatgctagcttcacgtgctcctgtcccactggctttgagggaccg
acctgtggggtgaacacagatgactgtgtggagcacgcgtgtgccaacgggggcagctgt
gtggacggcgtgggcaactacacctgtcagtgccccctgcagtatgtgggaaaggcctgt
gagcagctggtggacttctgctccccggatttgaacccgtgtcagcacgatgcccaatgt
gtaggcaccccagatggccccaggtgtgagtgcatgccaggttacacaggccacaactgt
agtgagaaccaggacgactgtgggaaccaccgctgccagaacggagcccagtgcgtggac
gaagtcaacagttactcctgcctctgtgccgagggctacagcggacagctctgtgagata
cctccccgcccacctgcccccaggagcccctgtgaggggactgagtgccagaatggggcc
aactgtgtggaccagggcagccagcccgtgtgccagtgtctccccggcttcggtggcccc
gagtgtgagaagttgctcagtgtcaactttgtggaccgagatacttaccttcagttcact
gatctgcagaattggcctcgggccaacatcacgctccaggtctccacggcagaggacaat
gggatcctactgtacaacggagacaatgaccacatcgcggttgagctgtaccagggccac
gtgcgcgtcagctacgacccaggcagctaccccagctctgccatctacagtgccgagaca
atcaatgacgggcagttccacaccgttgagctggtcacctttgaccagatggtgaatctc
tccatcgatggcggcagccccatgaccatggacaactttgacaaacactacacgctaaac
agcgaggcccccctttatgtgggaggtgaggacctggctcagggggaggtgacagcaatt
ccagggtgggacctattttgccctctggcttga
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