Loxodonta africana (African savanna elephant): 100674834
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Entry
100674834 CDS
T04351
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100674834 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100674834 (WDR33)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100674834 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Collagen
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100674834
NCBI-ProteinID:
XP_003416755
UniProt:
G3T841
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGSQGHIGPQ
GPPGSQGHLGPQGPPGPQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
PQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPTRGPHPPQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMAERRHDQSSGPDHGPERGPFRGGQDCRGPPDRRGPHPEFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHRDFSEGDGRGATRVPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEEFGPEENFDASD
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHAPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPATSEHREMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRPSSLDGDHHDGYHRDEPFGGPPGSGTPSRGSRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccag
gcacctcgacagctattttacaagcgaccggattttgcacaacagcaagcaatgcaacag
cttacctttgatggaaaacgaatgagaaaagctgtaaaccgaaaaaccatagactacaat
ccatctgtaattaaatatttggagaatagaatatggcaaagagaccagagagatatgcgt
gcaattcagcctgatgcaggttattataatgatctggtcccacctataggaatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttagaacatcaacaaacaaagtgaagtgt
ccggtatttgttgttaggtggactccagaaggaagacggttggtaactggagcttctagt
ggagaattcaccttgtggaatggacttactttcaattttgagacaatattacaggctcac
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagat
catggaggatatgtgaaatactggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaactaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattgaatctcaacggc
aattggctactcacagcgtcacgtgaccatctctgtaaactttttgacatccgaaacctg
aaagaagagcttcaggtcttccgaggtcataagaaagaggccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtccgatggttctttgttattctggcac
gttggggtggagaaggaagtaggtggaatggagatggcccatgaaggaatgatctggagt
ctggcgtggcatcctcttggacatattctctgctcaggctcaaatgaccacactagcaaa
ttttggacccgaaatcgaccgggtgataaaatgcgagatcgatataatttaaatctacta
cctggaatgtctgaagatggtgtagaatatgatgaccttgaacctaatagcctggcagta
attccagggatgggaataccggaacaactaaaattagccatggaacaagagcagatgggg
aaagatgagtcaaatgaaattgaaatgacaattccgggtttagattggggaatggaggaa
gtgatgcaaaaggatcaaaaaaaagtacctcagaagaaagttccatatgcaaaacctatt
cctgctcagttccagcaagcttggatgcaaaataaagttccaattcctgctccaaatgag
gtactaaatgacagaaaagaggacattaaattggaagagaagaaaaaaacacaagcagaa
atcgagcaagaaatggccacactgcagtatactaacccacaactcctagagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccctcatctggcacc
cctcttctcggaccccagccatttccaggacaaggtccaatgtctcaaattcctcaaggt
tttcaacagccccatccatctcagcagatgccaatgaacatggctcagatggggccacca
ggcccacagggacagtttagaccccctggaccgcagggacaaatgggaccacaaggccct
ccactgcatcagggaggtggggggccccaaggattcatgggaccacaagggcctcagggc
ccaccccagggattgcccaggcctcaggacatgcatgggccccaaggaatgcaaagacat
cctggacctcatggccctttgggacctcaagggccacctggaccacagggtagttctggt
ccacaaggtcatatgggtcctcagggcccacctggctcacagggtcatataggcccccag
ggcccacctggttcccagggtcatttgggccctcagggaccacctggtcctcaaggtatg
cagggaccacctggtcccagagggatgcaaggacctcctcatcctcatgggatacaaggt
ggaccagggtctcaagggatccagggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggacctccaggcccccgagagaatcagggtcctgctccccaaggg
atgatgatgggccacccgcctcaagagatgagaggacctcaccctccaagcggactgctg
ggacatggccctcaggagatgagaggtccccaggagatgcgaggcatgcaggggcctcca
ccccaaggatcaatgctgggccctccccaggaattgcgggggcctcctggctcacaaggt
cagcaggggccgccccagggctccttggggcctccaccccaggggggcatgcaagggccc
cctggacctcagggacagcagaacccgacaagagggccacatccacctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaatcag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaatcctggacaaggacctggccctaataaaggtgactcccgc
ggccctccgaaccatcacatgggccccatggcagagaggcggcatgaccagagcagtggc
cctgaccatggtccggagagggggcctttccggggcggccaggactgcaggggcccccca
gacaggcgtggccctcaccctgagttccctgatgacttcagcagaccagatgacttccac
cctgacaaacgctttggccaccggttacgtgaatttgaggggcgaggaggacctttacca
caagaagagaaatggaggcgagggggtcccggacctccttttcctcctgatcacagggac
ttcagcgaaggagatggtcggggtgccactcgagtacccccaggggcatgggaaggccgc
cgaccgggagatgaaagattcccccgtgatcctgaggacccgcgttttcgagggcgcaga
gaagaaagcttcagaagaggagcccccccaagacatgaaggccgtgctccccctagagga
agagatgggtttcctggtcctgaagaatttggtccagaagagaattttgatgcttctgat
gaagcagcccgaggaagagatctcaggggtcgaggtcggggtacaccacgaggaggaagg
aagggcttacttcccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccaggcccaggtcacgaacatttccgtgatgcccctcgc
cctgatcatgccccccatgatggtcattccccagccagcagagaacggtcctcttctctc
caaggcatggacatggcatcactgccaccccgaaagcgcccctggcatgacgggccagcg
acttctgagcacagagaaatggaagcccctggggggccttcggaagatcgaggtggcaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatctgggcgtcccagctccttg
gatggtgatcatcatgatgggtaccaccgagatgaaccttttgggggccctccgggcagt
ggtaccccttctagagggagcaggagtggcagtaactggggtagagggagtaacatgaac
tctgggccaccaaggcgaggcgcttcaaggggtggtggaagaggccggtag
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