Loxodonta africana (African savanna elephant): 100676335
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Entry
100676335 CDS
T04351
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04145
Phagosome
lav04148
Efferocytosis
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav04810
Regulation of actin cytoskeleton
lav04820
Cytoskeleton in muscle cells
lav05165
Human papillomavirus infection
lav05205
Proteoglycans in cancer
lav05410
Hypertrophic cardiomyopathy
lav05412
Arrhythmogenic right ventricular cardiomyopathy
lav05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100676335 (ITGB5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100676335 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100676335 (ITGB5)
04148 Efferocytosis
100676335 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100676335 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100676335 (ITGB5)
04810 Regulation of actin cytoskeleton
100676335 (ITGB5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100676335 (ITGB5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100676335 (ITGB5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100676335 (ITGB5)
05412 Arrhythmogenic right ventricular cardiomyopathy
100676335 (ITGB5)
05414 Dilated cardiomyopathy
100676335 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100676335 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100676335 (ITGB5)
Membrane trafficking [BR:
lav04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100676335 (ITGB5)
Cell adhesion molecules [BR:
lav04515
]
Integrins
Integrin beta subunits
100676335 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
100676335
NCBI-ProteinID:
XP_010591201
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MTPQEVAVNLRPGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPNCVPSFGFRHLLPLTDRVD
SFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVYTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNF
TALIPGTTVEILHGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYP
GQRKCEGLKIGDTATFDVSVEARSCPGRQVEQRFTLRPVGFRDTLEVGVAYSCTCGCSAR
LEPDSTRCSGNGTYVCGLCECNPGYLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGEC
SCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECRCHAGYIGDNCNCS
TGISSCQAKDGQICSDRGHCVCGQCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLH
SGKPAGNQTCHNYCKDEVITWVDTIVKDDQEAVLCFYKTAQDCVMMFTYTELPSGKTNLT
VLKEPECGSAPNAMTILLAVVGSILLIGIALLAIWKLLVTIHDRREFAKFQSERSRARYE
MASNPLYRKPISTHTVDFTFNKFNKSYNGTVD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacaggaggtggcggtgaaccttcggccaggtgacaagactacctttcagctg
caggttcgacaagtggaggattatcctgtggacttgtactacctcatggacctctccctg
tccatgaaggatgacttggacaacatccgaaacctgggcaccaagctcgctgaggagatg
aggaagcttaccagcaatttccgattggggtttggctctttcgtagacaagaacatctcc
cctttctcctatacagcgccgaggtaccagaacaatccatgcattggttacaagttattt
ccaaactgcgtcccatcctttgggttccgccatctgctgcctcttacagacagagttgac
agcttcaacgaggaagtacggaaacagagggtgtcccggaaccgagatgccccagagggg
ggctttgacgcagtcctccaggcagctgtctgcaaggagaagattggttggcgaaaggat
gcactacacttgctggtgtacacaacagatgacgtgccacacatcgcactggacggaaaa
ctgggcggcctggtgcagccgcatgatggccagtgccacctgaatgaggccaacgaatat
accgcatccaaccagatggactatccatcccttgctttgcttggagagaagttagcagag
aacaacatcaacctcatctttgcagtgacaaaaaaccattatatgctctacaagaatttt
acagccctgatacctggaacaacagtggagattttacatggagactccaaaaatatcatt
cagctgattatcaatgcgtacaatagtattcggtctaaagtggagctgtcagtctgggat
cagcctgaggatctcaacctcttcttcactgctacctgccaagacggtgtatcctaccct
ggtcagaggaagtgtgaaggcctcaaaatcggggacacggcgacctttgatgtgtcagtg
gaggcccggagctgccccggcagacaggtggagcagaggttcaccctgcggcccgtgggg
ttccgggacaccctggaggtgggggtcgcctacagctgcacgtgtggctgcagcgcccgg
ctggagccagacagcaccagatgcagcggcaatgggacttacgtttgcggcctgtgcgag
tgcaaccccggctacctgggcaccaggtgcgagtgccaggaaggggagaaccagagcggg
taccagaacctgtgccgggaggccgaggggaagcccctgtgcagtgggcgcggggagtgc
agctgcaaccagtgctcctgctttgagagcgagttcgggaagatctacgggcctttctgt
gagtgcgacaacttctcctgtgccaggaacaagggagtcctctgctcaggccacggcgag
tgccactgtggagagtgcaggtgccacgcaggttacatcggggacaactgtaactgctcg
acgggcatcagctcgtgccaggccaaggacggccagatctgcagcgaccgtgggcactgc
gtctgtgggcagtgccagtgcacggagccgggagcctttggggagacgtgtgagaagtgc
ccgacctgccccgatgcctgcagtactaagagagattgtgtcgagtgcttgctgcttcac
tcagggaaaccagctggcaaccagacgtgccacaactattgcaaggatgaggtgatcacg
tgggtggacaccattgtgaaagatgaccaggaagctgtgctttgtttctacaaaactgcc
caagactgtgtcatgatgttcacctatacggagctccccagtgggaagaccaacctgacg
gtcctcaaggagccagagtgtggatctgcacccaacgccatgactatcctgctggccgtg
gttggcagtatcctcctgattgggattgcgctcctggccatctggaagctgctcgtcacc
atccacgaccgaagagagtttgcaaagttccagagtgagcgatccagggcccgctatgaa
atggcttcaaaccctctgtatagaaagcccatctccacacacaccgtggacttcaccttc
aacaagttcaacaagtcctacaatggcacggtggactga
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