KEGG   Lysobacter avium: INQ42_00265
Entry
INQ42_00265       CDS       T08144                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
lavi  Lysobacter avium
Pathway
lavi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lavi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    INQ42_00265
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lavi02044]
    INQ42_00265
Secretion system [BR:lavi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   INQ42_00265
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF3540 DUF6484 Sarcoglycan_1
Other DBs
NCBI-ProteinID: QOW23191
LinkDB
Position
complement(54090..56804)
AA seq 904 aa
MDIQSVARALSRVSQDERLIELSTALPDALVVERFEGREAVCDDFRFTVDCLSTDAFLDA
RALLGQPMSLRLRLANGGLRHWHGHCTRVLPLGSDGGLARYRLVMEPWTAFLKLRRNALV
FQDLDALGVLERVLDDYPQAALRVDATQALPTYPITTQYRESDHAFVFRLLADAGLAWRF
EHAQDSEGGVTLVVFDRDAAVPEAMEPTLRFHRSDATEASDAIQRFSEQRQTTASIVGTA
SWQPAQVEAVATVATGAPAGPNAPSLESFSAPRSGRFASRSDADQHASLQLDALRLPQRV
HHGAGSVRSMAAGFGFILTQHPDLSGQAFLPLVIEHRAANNLDSGVVELLGHAGDIERGN
YRNRFLAVTSGTPVVPVARYKPSAPGLQTAMVVGLPESAVTSTRDHQVRIQFPWQRGTAP
NTGGLTDTGSHANPDGHAPGDDTSGTWVRVAEWMAGPNWGSHALPRVGSEVLVEFLHGDI
DQPVITGQLYNGNVAPPFALADASNHPGTLSGLHTQSLDGSDTQQWVMDDAPGQLRQRLH
TSLADSRLELGYLIDHDNARRSGVRGSGFDLATLGWANVRAGQGMLLSTTGRPDGVSTQM
DVTEAVAQLKGAQRTAQALDDAVGIAQVAPLRANERQTDLLGSVDPEQDGHYSGAVNGQA
ATKPAGGQRDGGDPVERLATPLMFVEGPDAIALATPKSALAYAGGNLHLTTQQDAHIAAG
QTFAGVAGGQLALFAQRGPIKAIAADGPVSLQAHTGKLEVLADQSVTITASDERIDVLAK
EKIILQAGQTRITLEGGDITFACPGEFRVKAGQVPFAGGAKAENTIPALPISLAQMFSEQ
FRVVNDDGNTPLVGAHYRIDGQDGQYWEGVTDSDGLTERVYTRSVTGLTLSIIAPSNDKD
ITIR
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggatatccagtctgtcgcccgtgcgctgtcgagggtctcgcaggacgagcgcctgatc
gaactctccaccgcgctgcccgacgcgctggtggtcgagcgcttcgaaggccgcgaggcg
gtctgcgacgatttccgtttcaccgtggactgcctgtccaccgacgcctttcttgatgcg
cgagccctgctcggccagccgatgtcgttgcggttgcgtctggccaatggcggcctgcgt
cactggcacggccactgcacccgggtgttgcccttgggcagcgacggcggactggcccgc
taccggttggtgatggagccatggaccgcgtttttgaagctgcgccgcaacgcactggtg
ttccaggacctggacgcactcggcgtgctggagcgcgtgctggacgactacccgcaagcc
gcgttgcgcgtggacgccacccaggcgctgccgacctacccgatcaccacccagtaccgc
gagagcgaccacgcctttgtgttccgcctgctcgccgatgccggactggcgtggcgcttc
gagcatgcccaagacagcgagggcggggtcaccctggtggtgttcgaccgcgacgcggcg
gtgccggaggcgatggaacccaccctgcgcttccaccgcagcgatgcgaccgaggccagt
gatgcgatccaacggttcagcgagcagcgccagacgaccgccagcatcgttggcaccgcc
agttggcagcccgcacaggttgaggcagtggcgaccgtcgccaccggtgcaccggccggc
ccgaacgctccgtcactggagtcgttctcggctccgcgcagcggtcgatttgcctctcgc
agcgatgccgatcaacacgcgtcactgcaacttgacgcgttgcgcctgccgcagcgcgtg
catcacggcgccggcagcgtgcgcagcatggcagcaggctttggcttcatcctgacccag
caccctgacctgtccgggcaggcgttcctgccgctggtgatcgagcaccgcgccgcgaac
aacctggacagcggtgtcgtcgaactgctgggccacgccggcgatatcgagcgcggcaac
taccgcaaccggtttctcgccgttacctcgggaaccccggtggtgccggtcgcccgctac
aaaccgtcggctccggggctgcagaccgcgatggtggtcggccttcccgaatcggccgtt
acctccacccgagaccatcaggtgcggatccagttcccctggcaacgcggcaccgcgccc
aacaccggcggcctgaccgacacaggttcccacgccaatccagatggccacgcccccggc
gatgacaccagcggcacctgggtgcgcgtggccgagtggatggccggacccaactggggc
agccacgccctgccccgcgtcggcagcgaggttctggtcgagttcctacacggcgacatc
gaccagccagtcatcaccggccagctctacaacggcaacgtcgccccgcccttcgccctg
gccgatgccagcaaccaccccggcaccctcagcggcctgcacacgcagagcctggacggc
agtgatacccagcaatgggtgatggatgacgctcccggccagctgcgccagcgcctgcac
accagcctggccgacagccgactggagctggggtacctgatcgaccacgacaacgcccgc
cgcagcggggtgcgtggatcgggcttcgatctggcgacgctgggctgggccaacgtgcgc
gccggccagggcatgctgctctcgacgaccggccggccggacggtgtatcgacgcagatg
gacgtgacggaggccgtcgcccagctcaaaggcgcgcaacgcaccgcgcaggcgctggat
gacgcggtcggcatcgcgcaggtcgcgccgctgcgcgccaacgaacgccagaccgacctc
ctcggctcggtcgatcccgagcaggacggccattacagcggcgccgtaaacggccaagcc
gcgaccaagcccgcaggtggtcagcgtgacggcggcgatcctgtcgagcggctggccacg
ccgctgatgttcgtggaaggcccggatgcgatcgcccttgcaacacccaaaagtgcactg
gcgtatgccggcggcaacctgcacctgaccacccagcaggacgcccacatcgccgcaggc
cagacctttgcgggggtggccggcggccaactggccctgttcgcccagcgcggcccgatc
aaggcgatcgccgctgacgggccggtcagcctgcaggcccacacggggaaactggaggta
ctggcggaccagtcggtcaccatcaccgccagtgatgagcgcatcgacgtgctcgccaag
gagaagattattctgcaggccggtcagacgcggatcacgctggagggtggcgatatcacg
ttcgcgtgcccaggggagtttcgagttaaggcggggcaggtgccgtttgcgggtggggcg
aaggcggaaaatactattccggcactcccgattagcttggcccagatgttcagcgagcag
ttccgcgtcgtcaacgacgacggaaataccccgctagtcggagctcattatcggatcgac
ggacaggacggacaatattgggaaggcgtaacggacagcgacggccttaccgagagagta
tacacgcgaagcgtcacaggattgacgctaagcattattgcgccatcgaacgataaggac
atcaccatccgatga

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