Lysobacter avium: INQ42_01330
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Entry
INQ42_01330 CDS
T08144
Name
(GenBank) type VI secretion system tip protein VgrG
Organism
lavi
Lysobacter avium
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Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
DUF2345
T6SS_Vgr
Phage_base_V
DUF6484
Motif
Other DBs
NCBI-ProteinID:
QOW22285
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Position
complement(308336..311104)
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AA seq
922 aa
AA seq
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MDARATLLTALAAAPRQFDRLLQLHTGLGRDVLVAESLHGVESVDDGGYRLQLDALSVDA
HLPLDELLGQPVLLELLTAESASQRRPFHGHITACERVGSNGGIARYRVVIEPWLAFLRQ
RADSYVFHDMSVLEIAEDLFADYAQAGALAPAWRWELSDRSVYRTRSLTTQYHESDFHFL
QRLLAEEGIAYWFEHTGDTAGETLGNHTLVLGDHPEAFADAGSVRFHRADATERADSIQQ
WANTRRWQTASISRASWDYRSRTLRPASSQSVLAGSDVTTEDVDTSGPYGVADEAHAALR
ASRQMEASDVTGRLIRAAGTWRRQAPGTRFSLTQHPDTNGKSYTCLRVEHAARNNLGAEV
FEVLDQNLGLSDIGALPLPTALSSDTGLADEMGAAPATDFYRNTLTAIPADLPYRPRTVD
GHGLRLHPKPTVRGTQTAIVVTDGAPLQTDRDHRIKIQFPWQRGSKASSGMAHPDGDDNA
PGSDAAWTWVRVATPWAGDNWGSVMLPRKGQEVVVAFMEGDIDRPVIVGSLYNGAGQPDA
PHNQVNGGKAGATGNAPAWFDGNEHPAVFTGFKSQALGASQTGSGGYQQLRLDDTPGQGR
AQVATTQHATTLTLGHLKGGEDNVRGRECGFGVELSTQASGALRAGAGLLLSTEPGRQQM
AADGLRSQLASGAELMQSLSDTARAQTADLPDEADALPAQEALKQVQDTSSGTFTGAASG
DGVSGGDGEAPGWSAPLLAASSPDGIIATTPADQIWVSGTQTTLTAGNDLNWLSQGETVI
AVAEGISLYSHGTPAPGGKPQTSTGIALHAAQGDVSARAHKNVATAAAKISVTLASTQAD
VEIASPNKHVLATAAGAYLKLEGGDIELGAPGTIEFKAAKKEWTSPEAASMQVKLPSGEL
KLCEFKSRGADAAGDGLIPLQR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcgcgccaccttgctcaccgcactcgctgccgcgccaagacagttcgatcgt
ctgctgcagctgcatacgggattgggtcgggacgtgctggtcgcggagagtcttcacggc
gtggagtcggtcgacgacggtggctatcggctgcagctggacgcgctgtcggtggacgcg
caccttccgctggatgaactgctcggccaaccggtcctgctggaactgctgaccgccgaa
tccgcctcccagcgccgccccttccacggtcacatcaccgcctgtgagcgggtcggcagc
aacggcggcatcgcccgctaccgcgtggtcatcgagccctggctggcgttcctgcgccag
cgggcggacagctacgtctttcatgacatgagcgtgctcgagatcgccgaggaccttttc
gccgattacgcacaggccggggcgctggcgccggcgtggcgctgggagctttccgaccgg
tcggtctatcgcacccgcagcctgaccacgcagtaccacgagagcgatttccacttcctc
cagcgcctgctcgccgaggaaggcatcgcgtactggttcgagcacaccggcgacaccgct
ggcgagacgctgggcaaccacacgctggtgctgggcgaccatcccgaagcgtttgcggac
gccgggagtgtgcgcttccatcgtgccgacgccaccgagcgcgcggacagcatccagcag
tgggccaacacccggcgctggcagaccgcctcgatcagccgcgccagctgggactaccga
agccgcacgctgcgcccggcctcgagccagagcgtcctggcgggcagcgacgtcaccacc
gaggacgtcgacaccagcggtccgtacggtgtggccgacgaggcgcacgccgcgttgcgg
gcaagccggcagatggaggcaagcgatgtcacgggtcgcttgatccgcgccgccggcacg
tggcgccgccaggcaccgggcacccggttctcgttgactcaacaccccgacaccaacggc
aagtcgtacacctgcctgcgtgtagagcatgccgcccgcaacaacctgggcgcggaggtg
ttcgaggtgcttgaccagaacttggggctgagcgacatcggcgcgttgccactgccgacg
gcgctgtcgtcggacaccggcctcgccgatgagatgggcgcagcgccggcgacggatttc
taccgtaacaccctcaccgcgatcccggccgacctgccctaccgcccgcgcaccgtggac
ggccatgggctgcgcctgcacccaaagcccacggtccgcggcacccagaccgcaatcgtg
gtcaccgacggggcgccgctgcagaccgaccgcgaccaccgtatcaagatccagttccca
tggcagcgcggcagcaaggccagctcaggcatggctcaccccgacggcgatgacaacgcg
cccggcagcgatgcggcgtggacgtgggtgcgcgtcgccaccccgtgggcgggcgacaac
tggggcagcgtgatgctgccgcgcaaaggtcaggaagtcgtcgtggctttcatggaaggc
gatatcgaccgccccgtcatcgtcggcagtctctacaacggtgcgggccagccggacgcg
ccgcacaaccaggtcaacggcggcaaggctggcgccaccggcaatgccccggcgtggttc
gacggcaacgaacatccggccgtgttcacaggcttcaagagccaggccctcggggcgagc
cagaccggtagcggcggctaccagcagctgcgcctggacgacacacccggtcagggtcgc
gcgcaggtcgccaccacccagcacgccaccacgctgaccctcgggcacctcaagggcggg
gaggacaacgtgcgcggccgcgagtgcggcttcggcgtggagctgtccacccaggccagt
ggcgccctgcgcgccggcgccgggctgctgctgagcaccgagcccggccgccagcaaatg
gccgccgacggactgcgcagccaactggccagcggcgccgaactgatgcagagcctgtcc
gataccgccagggcacagactgccgacctgccggacgaagccgatgccctccccgcacag
gaggcactgaagcaggtacaggacacctcgagcggcaccttcaccggcgccgcttccggt
gacggcgtcagcggtggcgacggcgaagcccccggctggagcgccccgctgctggctgcc
agcagtcccgacggaatcatcgctaccactccggccgaccagatctgggtgtccggcacc
caaaccaccctgaccgccggcaacgacctgaactggttgagccagggcgagacggtcatc
gcggtcgcagaaggcatcagcctctacagccatggcacccccgccccgggcggtaaaccg
cagaccagcaccggcatcgcgctgcatgccgcccagggcgatgtgagtgcacgggcgcac
aagaacgtggccaccgccgcagcgaagatcagcgtgacactcgccagcacccaggccgat
gtggagatcgcatcgccgaacaaacatgtcctggccaccgctgccggcgcctatctgaaa
ctggaaggcggcgacatcgaactgggtgcgccggggacgatcgagttcaaggcggcgaag
aaggaatggacttcgccggaggcggcaagtatgcaagtcaaactgcctagcggagagcta
aaactctgcgaattcaaatcccgtggcgcggatgcggctggtgacggactcattccgctg
caacgttga
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