Lycium barbarum (goji berry): 132599374
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Entry
132599374 CDS
T09483
Name
(RefSeq) alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132599374
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132599374
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132599374
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
132599374
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132599374
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132599374
Prokaryotic type
132599374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
132599374
NCBI-ProteinID:
XP_060168693
LinkDB
All DBs
Position
6:136718093..136727485
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AA seq
1024 aa
AA seq
DB search
MCHTHKGRLISPPTYINCQFKTKHTQHRPRKTPSMTNLNFSYSLKTSHGTHSLLLFPTSR
FQSKPFLPSSRGYRYSSGLIVRTRTLIYASSLSHGRPSIKGPREVQFATKALPVAEELVE
GMLRDPQTSGDAIRQRFLDFYAARGHKVLPSASLVPDDPTVLLTIAGMLQFKPIFLGKVP
REAPSAATSQKCIRTNDIENVGQTSRHQTFFEMLGNFSFGDYFKKEAIKWAWELSTSEYG
LPADRLWISVYQDDDETFALWHDELGVPKERIIRLGEDDNFWTSGVTGPCGPCTELYYDF
HPERGTSDVDLGDDTRFIEFYNLVFMEYNKKDDGSLEPLKQKNIDTGLGLERMARILQKV
PNNYETDLIFPIIEKAAELANVSYSLADDSTKTKLKIIGDHMRAVVYLISDGVNPSNIGR
GYVVRRLIRRVVRTGRLLGVKGNGMGDLQGAFLPILAKKVIELSTNVDADVKTRSSRILE
ELKREELRFVLTLERGERLLDQMLADALLNTQGTGTAPCLSGKDAFILYDTYGFPVEITK
EVAEERGISIDMNSFDIEMEKQRQLSQAAHDTVKLSVENGANLAEDIPDTEFLGYNTLHS
KSLVEGLLVNGSPVAQVSKGSEVEIFLNRTPFYAESGGQIADNGFLYSTEAENEQKAIVE
IKDVQKSMGNIFVHKGTITEGTIEVGREVEAAVNANLRQRAKVHHTATHLLQSALKRVIG
QETSQAGSLVAFDRLRFDFHFHRPLQDKELVEIEGLINQWIGDAAILETKVMSLTDAKGA
GAIAMFGEKYGEQVRVVEVPGVSMELCGGTHVSNTAEIRGFKIISEQGIASGVRRIEAVA
GDAFIEYVLTRDNYMKQLCSTLKVKAEEVTGRVDGLLEELRLTRNEVSAARTKAAIYKAS
TLSSRAATVGTSKSIRLIVESMDDIDADSLKSAAEYLVDLLKDPAAVVLGSCPGEGKVSL
VVALTPGVVDLGIKAGEVIKPLAKSCGGGGGGRPNFAQAGGRKPENLPGALEEAREQLKK
LLDK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacacccacaaaggcaggcttatctcaccaccaacgtacataaactgccaattt
aaaacgaagcacacacagcacaggccaagaaaaactccctccatgactaacctcaacttt
tcttattccttaaagaccagccatggcacgcactccctactcctatttcccacttcaagg
ttccaatcaaaaccttttcttccctcttcaagaggttacaggtattcttcaggtttgatt
gtaaggactcggaccttaatttatgcaagtagtttatcccatggacgccctagtattaag
ggaccaagagaagtacagtttgccacaaaagcactacctgtggctgaggaacttgtagag
ggtatgttaagggatcctcagacaagtggtgacgctatacgccagcgcttcctcgacttt
tatgctgcaagaggtcacaaggttcttccaagtgcttcccttgtcccagatgatccaaca
gttctattgacaattgcaggaatgcttcagtttaagcctatattccttggaaaggtaccc
agggaagcgcctagtgcagctacttctcagaaatgtatccggacaaatgatattgagaat
gtgggtcaaacatcccgacatcaaacattctttgagatgcttggaaattttagttttgga
gattactttaagaaggaagctattaagtgggcatgggagctctccacctcagaatatgga
ctcccagctgatagattatggattagtgtttaccaagatgatgatgaaacttttgcacta
tggcatgatgagttaggtgttcctaaagagcgaataataagacttggagaagatgacaac
ttctggacaagtggagttactggtccgtgcggtccatgcactgaactttattatgatttc
catcccgagaggggcacttccgatgttgatcttggagatgatacaagatttatagagttc
tacaaccttgtttttatggaatacaataagaaggatgatggttcacttgagcctttaaag
caaaagaatatagatactggacttggtttagagcgtatggccaggattctgcagaaggtc
cccaacaattacgaaaccgacttaatatttcccatcatagagaaggctgcagaattggca
aatgtctcatattctcttgcggatgattctacaaaaacaaagcttaaaataattggagat
catatgcgtgcagttgtttatctgatatctgatggtgtcaacccatcaaatattgggagg
gggtatgtggtacgtcgactcattaggagggttgttcgaacgggcaggttacttggtgta
aaaggaaatgggatgggtgatcttcaaggagcatttttgccaatacttgccaaaaaagtg
attgaactgagcaccaatgtagatgctgatgtgaagacaagatcatcccgcatacttgag
gaattgaaaagggaggagcttcgttttgtcttgactctagaaaggggagaaagacttctt
gaccagatgctggcagatgcattattaaacactcagggaactggtaccgcaccgtgtctg
tcgggcaaggatgcgttcatattgtatgacacctatggatttcccgtggagataacaaag
gaagttgctgaagaacgtggaatcagtatagacatgaatagctttgacatagaaatggag
aagcaaagacagctatctcaggctgcacatgatacagttaaactatcagttgaaaatggc
gcaaaccttgctgaagatatccctgataccgagtttcttggctacaatactctccattcc
aagtcattggttgagggtttattggtaaatggtagtcctgtagcacaagtctccaaagga
agtgaagtggaaatttttctgaacaggactccattttatgctgagtcaggaggccaaatt
gcagataacggttttctatacagcaccgaggctgaaaatgaacagaaagctattgtagag
ataaaagatgtccaaaaatccatgggtaatatcttcgtccacaaggggacaattacagaa
ggtactatagaggttggccgagaagtagaagctgctgtcaatgcaaacttgaggcaacgg
gctaaggttcaccatacagctactcatttacttcaatcagcactgaaaagagtaattggt
caggaaacatctcaagcaggatcattggttgcttttgatcgtcttagatttgacttccac
ttccatcggcctcttcaagacaaggaacttgtagaaattgaaggtttgattaaccaatgg
attggcgatgctgctattctggaaacgaaagtcatgtctttgactgatgcaaaaggagct
ggggccattgcaatgtttggagaaaaatatggagaacaggtacgtgtagtcgaggttcct
ggagtatcgatggaattatgtggtggcacccatgtcagcaatacagctgagatacgtggc
ttcaaaatcatatcagaacagggaattgcatcaggagttaggcgaattgaagctgtagct
ggagatgctttcattgagtatgtccttaccagagataactacatgaagcagctatgctcc
actctcaaagtaaaagcggaagaagttactggcagggtagatggacttttggaagaacta
cgattgacaagaaatgaagtttcagctgctcggactaaagcagcaatctataaggcatca
acactctctagcagagcagctaccgttggaacttcaaaaagtattaggctcatagttgag
tccatggatgatattgatgccgattcactcaagagtgctgcagaatatcttgtggatttg
ttgaaagatccagcagctgtggttctaggatcatgcccgggagaaggaaaagttagtctt
gttgttgctttaacccctggagttgttgatcttggaattaaagctggtgaagttataaag
cctctagctaaatcatgtggtggtggaggtggtggtcggcctaatttcgctcaggcaggt
ggtagaaaaccagagaacttgcccggcgctcttgaagaagctcgagaacagcttaaaaag
ctgcttgataaatga
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