Lycium barbarum (goji berry): 132622464
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Entry
132622464 CDS
T09483
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
lbb
Lycium barbarum (goji berry)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
132622464
NCBI-ProteinID:
XP_060193051
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Position
12:complement(94733696..94752851)
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AA seq
1409 aa
AA seq
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MSSDTGTLTLTSTTLYTTALNKSSSNSVSLSLSPIPSSIPQPKLIPKTRFIIDGFKYAND
FSVSYFLSHFHSDHYTGLSSNWSKGIIFCSSITANLLIKVLNVPKQFVVSLPLSKKVLID
GSEVFLVDANHCPGAVQFLFKVPVSNGKFERYVHTGDFRYCDDMKLEPVMDAFVGADAVF
LDTTYCHPKFIFPSQQESIDYIVGVIENEGSLKNILFLIATYVIGKEKILVEVSRRCRRK
IYVDGRKMDVLNVLGHEEDGVFTTDESETDVHVVGWNVLGETWPYFRPNFEKMDKIMNEK
GYSKVVGFVPTGWTYEVKRNKFSVRKKDSFEIHLVPYSEHSNYDELRQYVKFLKPKRVIP
TVGTDVEKLDSKHANAMRKHFAGLVDEMAIKQEFLLGFHRCVQGEEDVDAKKSGLALVSI
TEQENTNESAHTLVSIIKQENEDTPSDAKSCNAADRDTVDHSSFPLGEPVSRGLEKISEG
DMEEILKELQDCLPTWVTKVQMLYLLSISGKNVVDAVTNFYEHETEYREQVTASNSVTSS
FEANSANGSALPSKPCLGKSPQQDETTASSKTFKLPIMYSSSSKNISPGKRKRSTGNKSS
KKAKGHARMESGGPKQCTITKFFSKPVPHSLQNLNSEADSKNFHDDNSVPLNVSIESYKE
EADRFIQIMDGDESLRSYATTVLVKTKGDISMALDIYFAECKDVGETNGDGIPKTIKLEQ
PLCAKEVCPSPKDDKLPKMLGDDADLLLCGVPVADNAVNYVSLPPGKYSPVEHACWSKGQ
AAPYIHLARTFGLVEEEKGKIKATSMLCNMFRSLLALSPEDVLPAVYLCTNKIAPDHENM
ELSIGGSTVVAALEEACGTKKSKVRELYNSLGDLGDVAQLCRQTQSLLAPPVALTVRGVY
AALRRISLQAGSGSAIRKKSLIVKLMCSCREKEMKFLVRTLVRNLRIGAMMRTVLPALAQ
AVVFNSTPYEGLVENLKECLQQLSADVVEAYNILPSLDVLVPSLMEKGIEFSSNTLSMAP
GIPIKPMLAKITNGAPQVLKLFQNKAFTCEYKYDGQRAQIHKLADGSVRVFSRNGDETTS
RFPDLVNIITESCGPRGTTFILDAEVVAIDRQNGSKLMSFQELSSRERGSKDSIIALDKI
KVEICVFVFDIMFANGEQLLNLPLRQRRKYLKDLFGDVKVGYFEYVTEMTVERNDACTDN
EATLARMNSFLDDALHSSCEGIMVKSLDVDAGYTPSKRSDAWLKVKRDYVEGLNDSLDLV
PIGAWYGNGRKAGWYSPFLMACYNPDTEEFQSVCRVMSGFSDSFYVEMRDFFDGDRIFQK
KPPYYRTAEVPDMWLSPEVVWEIRGADFTVSPVHHAAIGLVHPSRGISVRFPRFIQCLSD
RKPEECSTAADIADMFHSQTRKVNVNLEK
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacaccggaaccctaaccctaacctccaccactctatacacaacagctctg
aacaaatcctcatcaaattcagtctcactatccctctccccgatcccttcttcaatccct
caaccaaaactcatccctaaaactcgcttcatcatcgacggtttcaaatacgctaacgat
ttctccgtttcatacttcctctcacatttccactccgatcactatactggcctttcctct
aattggtctaaaggtatcattttctgctcttccatcactgctaacctacttatcaaagtc
ctcaatgttccaaagcagtttgtagtgtctttgccgctgtcgaaaaaggttttaattgac
ggttctgaggtttttttagttgatgctaatcattgtcccggtgctgtgcaatttttgttt
aaagttccggttagtaatgggaagtttgagaggtatgttcatacaggtgattttcgttat
tgtgatgacatgaaattagagcctgtaatggatgcatttgttggtgctgatgctgtgttt
ttggatactacttattgccaccccaagtttatattccctagtcaacaagagtcaattgat
tatatagttggagttatagagaatgagggttcattgaaaaatatcttgtttcttattgct
acttatgttattgggaaagagaagatcttggtggaggtttcacggaggtgtcggagaaag
atctacgttgatggcagaaaaatggatgttttgaatgtattaggtcatgaggaggatggg
gtgtttactactgatgaatctgaaactgatgttcatgtggttgggtggaacgtattgggt
gagacgtggccatatttcagacccaattttgagaaaatggataagattatgaatgagaaa
gggtattccaaggtggttggttttgtcccaacaggttggacttatgaagtgaagcggaat
aagttttcagtgaggaagaaagattcctttgagatacatcttgttccgtatagtgaacat
tcaaattatgatgagcttagacagtatgtgaagtttttgaaaccaaagcgtgttatacca
actgtaggtacagatgttgagaagctggacagcaaacatgctaatgccatgcggaagcat
tttgctggcttggtcgatgagatggccatcaagcaagaatttcttttaggttttcatcgt
tgtgtccaaggggaggaggatgtagatgcgaaaaaatctggtcttgctttagttagtatc
accgagcaagaaaacacaaatgaatctgctcatactttagtcagtatcatcaagcaagaa
aatgaggatactccatcagatgctaaaagctgcaatgctgctgatagggatactgttgac
cattcctcatttcctctaggagaacctgtgtcgcgaggtttagaaaaaataagtgaaggc
gatatggaggaaatactaaaagaacttcaagactgtttgcccacttgggtcactaaagta
cagatgttgtatctccttagtatttcgggaaaaaatgttgttgatgcagtcacaaacttt
tacgaacatgaaacagaatatcgtgaacaggtcactgcaagtaattctgttacctcttca
tttgaggccaactcagcaaatgggtctgcattgccttccaaaccatgtcttggtaaaagc
ccgcagcaggatgagacaactgcatcaagtaaaacctttaaactgcccatcatgtacagt
tctagtagcaaaaacatttctccaggtaaaaggaagagaagtactggaaacaagtcatct
aagaaagcaaagggacatgcacgtatggaatctggtggaccgaagcaatgtactataaca
aaattcttcagtaaaccggtgcctcattctttgcagaatttaaacagtgaagctgatagt
aaaaatttccacgatgataacagcgtgccactgaatgtctctattgagagttataaagag
gaagctgatcggtttattcagattatggatggagatgagtcattaagaagttatgctacc
acagtactagtgaagactaaaggagacataagtatggcacttgatatttattttgcagaa
tgcaaagatgtaggagagactaatggagatgggattcctaaaacaatcaaattggagcaa
cctctatgtgctaaagaggtttgcccttctcccaaagatgataaattgcccaaaatgttg
ggagatgatgctgatttattgttgtgtggagttcccgttgcggataatgctgtaaattat
gtatcacttccacccgggaaatattctcccgtggaacatgcttgctggagtaaggggcag
gctgctccatacatacatcttgcacgaacttttggattggtagaggaagaaaaaggcaag
ataaaagcaacatcaatgttgtgcaatatgtttcgcagcttgctggccttgtctccagag
gatgtgcttcctgcagtgtacttgtgcacaaacaagatagctcccgaccatgaaaatatg
gaattgagcattgggggtagtactgttgtagcagcactagaagaggcatgcggaacaaag
aaatcgaaagtacgagaactatacaacagcctgggtgatcttggtgatgttgctcaactt
tgccgacaaacacagtcattacttgctcctccggtggcacttacagttaggggtgtatat
gctgctcttagaaggataagtttgcaagcaggtagtgggagcgcgatccgaaagaaaagc
cttattgtcaaactcatgtgttcgtgtagagagaaggagatgaagtttcttgtgagaact
ttggttcggaatttgcgcattggagccatgatgagaactgttcttcctgcattagctcaa
gctgttgtgttcaattctactccttatgaaggactggtcgaaaacctgaaagaatgtctg
cagcaactttcagcagacgtagttgaagcatataacatccttcccagcttggatgttctt
gttccttctttgatggagaaggggattgagttttcttcaaatacattgtcaatggcacca
ggcatacccatcaaaccaatgcttgcaaagattactaatggtgcccctcaagtgctgaag
ctctttcagaacaaagcctttacgtgtgaatacaaatatgatggtcagcgagcacagatt
cataaattagctgatggttcggtccgcgtattttcacggaatggggatgaaacaacatct
agattcccggatttggtgaacataattacagaatcatgtggtcccagaggaacaacattt
atcttggatgcagaggttgttgcaattgatagacaaaatggttcaaagctcatgtcgttc
caagaactatcttcacgagagagagggtccaaagattccatcattgcgttagacaaaatt
aaggttgagatatgcgtttttgttttcgatatcatgtttgcaaatggagaacaattgttg
aatctgccgctccgtcaaaggcgaaaatatttgaaggatttatttggtgacgtcaaagtg
ggttattttgagtacgtgacagaaatgaccgtagagcgcaatgatgcttgtacagataat
gaagccacattagctaggatgaacagctttcttgatgatgcactacattcttcatgtgaa
gggatcatggtgaaatcccttgatgtagatgctgggtacacaccatcaaagcgctctgat
gcatggttaaaggtcaagagagactatgttgaaggattaaatgattccctggacttggtt
ccaattggtgcttggtacgggaatggaagaaaagcaggatggtatagtcctttccttatg
gcctgctacaaccctgacacagaggaattccagagtgtctgccgggtcatgtctgggttt
tctgattccttctatgtagagatgagagacttcttcgatggggacagaatcttccagaaa
aagccaccctactatcgaactgcagaagtgccggatatgtggttgtctccagaagttgtg
tgggagatacggggtgctgacttcacggtgtcaccagtgcatcatgcagccattggttta
gtccatccatctcgtggtatttctgtcagatttcccaggttcatccagtgtttgtcagat
agaaaacctgaggaatgtagcacagctgcagatatagccgacatgttccactctcagact
agaaaagtgaatgtgaatcttgaaaaatag
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