Lycium barbarum (goji berry): 132631567
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Entry
132631567 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132631567 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132631567
03015 mRNA surveillance pathway
132631567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132631567
03041 Spliceosome [BR:
lbb03041
]
132631567
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132631567
Spliceosome [BR:
lbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
132631567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
132631567
NCBI-ProteinID:
XP_060203132
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All DBs
Position
3:73755108..73760911
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AA seq
883 aa
AA seq
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MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVMKPWIAKRVTEFI
GFEDEVLINFIYSLLERKLVNGKELQISLTGFMESNTGKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRMKKAETDRIASEIQKKKERENRELDQEKRKKMDDYGSNSRANNAAREPS
PKHQLQVRSMDDLDPVERNGSRVRNRVSKSPRSAADHSPSPRRSRSISKSFSNSRSYSGE
RCRSRSTSGSPEESRGRSLSSKRVYRSPPRSSVSPRRKHSPRRSLSPPRQRRRSTSRVRR
RSPSPSRYRRHSPFRRRSRSPFRHRSRSPLRRRSRSPIRRRSRSPRWSRSRSPRRRSPVR
YRSRSPIRRRSPLRRRTPSPTQRRSPSLVSRGYHRSPLSPRRSSPVLVQRKSSISGRKRS
LTPARRSLSPQESLSPSPIYRRSPAPIRKRISKNERSPVRSPRERIRSREKYSPVRHAPP
VKAEAHKGSRSLERSHPISSRSPQKDIYDRKDSREKEPPLPPQLSLLPSVPEPPHRSRSD
SESPPTKRERSPCEDRGPRSTLNRRERKTTDTDSPSPRKLREHKVGSDISEKIADDKEMN
QSREAFEHKPGSSRKIPTTPDRYKDLGKGWDEKKVSEIHSRSDRIEARKRNEVIKSENFS
GRMENTKELDQQKSPSTHRHSHSVKRVRESYDGEGFKADKENLSHTNDTKGKELHVEAEA
PLTSSRKVEQNDLSSNEGSGFEESEKRRAKVKEKRKHKRSDRYESSSDDSFDSDLEDRKE
AKKRRKEERRLKKEEKRRRREERRRRKEERRAQKLKSKSANAISLPSDTERNPDSRASDD
EHLRKEDQHRHQIEESESLQKRLEIELREKALESLRAKKGISH
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggcacgtctgccgagcaggacactcgcttctctaataag
caagctaagctcttaaaatctcagaagtttgctcctgaattggaacatctggtggacatg
acgaaggtgaagatggatgtaatgaaaccatggattgctaagcgagttactgagtttatc
ggttttgaagatgaagtgcttatcaatttcatctatagccttcttgaacgaaagttagtt
aatggcaaggagcttcaaatttcacttactggattcatggaaagcaacactggcaaattt
atgaaagagctttgggcgttactacttagtgcacagaacaatgctagcggtgttcctcag
cagttcctagaagccaaagaagaggaaatgagaatgaagaaggctgagacggatcgaatt
gcaagcgaaattcagaagaaaaaggagagagagaatagggagctggatcaagagaaaagg
aagaagatggacgattatggaagcaattcgagagcaaacaatgctgcacgggagccaagc
ccgaaacatcagcttcaggtgcgctcgatggatgatttagaccctgttgagagaaacggc
tcaagagtacgaaacagggtctctaaatccccacgttcagcagcagatcattcaccctcc
cccaggagatcaaggtcaatcagcaagtcattctccaattcgaggagttactctggtgaa
aggtgcaggtcacgaagtacttccggatctcctgaagaaagcagaggtcgctccctttca
tctaaaagggtatatcgctctccaccaaggagttctgtttcacctcggaggaaacattca
cctcgacgatccctttctccaccaaggcagaggcgaagatcaacctcccgagtacgtcga
aggtcaccttctccttcgcgataccgacgacattctccattccgacgtagatcgaggtca
ccattccgacacagatcgaggtctccgcttcgacgtagatcgaggtctcccattcggcgt
agatcacgatcccctaggtggagtaggtcaaggtctccaagaagacgctcaccagtgcga
tacagatcaaggtcacctattagacgtcgatcaccgcttcgacgcaggacaccttctcca
acgcaacgtaggtccccttctctagtgagtcgggggtaccaccgatctccattgagtcct
cggcgaagttctccagttttagttcaacgaaaatcctccatttctggtaggaagagatcc
ttaacccctgccagaaggtccctttcacctcaagaatcactttctccctcacccatttac
cgcaggtctcctgcaccaatcagaaagagaatatcgaagaatgagaggtcaccagttcga
tctcctcgggaaaggataaggagccgcgagaaatactcccctgttcgacatgctcctcca
gtaaaagctgaggcccataaaggatcaagatctttggaacgtagtcatcctatttcttct
aggtcaccacagaaggatatatacgaccgtaaggattcacgagaaaaagagccgcctttg
cctcctcagctaagcctgttaccatctgttccagaacctccacatcgctccagatccgac
tcagaatctccaccaaccaaaagggaaaggagtccttgtgaagatagagggccaaggagt
actttgaaccggagggagagaaagacaactgacactgacagccctagtccaaggaaattg
agggagcacaaagttggttcggacatttctgagaaaattgcagatgataaagaaatgaac
cagtcaagggaggcttttgagcataagcctgggtcttcaagaaaaattccaacaacaccc
gatcgatataaagatcttggaaaggggtgggatgagaaaaaggtttctgaaattcatagc
cgttcagatcgcatagaggcgagaaagcgaaatgaagtgattaagagtgaaaatttttcc
ggaaggatggagaacacaaaggaactggatcaacaaaagtcgccatcaactcatagacac
tctcattcagttaagagggtgagggaatcatatgatggggagggtttcaaagcagataag
gaaaacctgtctcacacaaacgataccaagggcaaagagctacatgttgaggcagaagct
cccctaacttcatcaaggaaagttgagcagaatgatctaagtagtaatgagggttctggt
ttcgaggaaagtgaaaagcgtagagctaaagttaaggaaaaaagaaagcataagaggtct
gatagatatgagtcatcgtcagatgatagttttgattctgatcttgaggataggaaggag
gctaaaaagaggaggaaagaggagagaagattgaagaaagaggagaagcgtcgccggcgg
gaggagaggcgacgcagaaaggaagaaagacgtgcccagaaactaaaatcgaagtcagct
aatgccatatctttgccttcagatacagagaggaatcctgatagtcgtgcttctgatgat
gaacatctgaggaaggaggatcaacatagacatcagatcgaggagtcagagtccttgcag
aaaagacttgagattgagctgcgggagaaggctcttgaatctcttagagcaaaaaagggc
atcagtcattaa
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