KEGG   Lycium barbarum (goji berry): 132636858
Entry
132636858         CDS       T09483                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132636858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132636858
Spliceosome [BR:lbb03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132636858
 Complex B
    132636858
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 132636858
NCBI-ProteinID: XP_060209886
LinkDB
Position
4:145825459..145837273
AA seq 613 aa
MDSSENGRSQLTPSHIGGENENEIAGVDNREEEHDSRKRRSSSKHSSRDYEGKRESSRSR
DRERDKGRDKDRDRSKEKERDRDRDREKDRDRHHRDRSERRRTRDRDGDGNVSDDGAESR
EYWQKDYDRDRDERHRHRSKSYEREREEGHRHRSKSYDKDREERDRHRSKSYDRDREERH
GHRSHSRGRSSHRSRSRSRSRSRSRSKSKRISGFDMAPPTSALLPGVPAVPVSAGQLPGT
APAIPGIFPNMFPLASGPLGAIPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATYFN
HVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRP
TDYNPSLAASLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLE
SFGPLRGFNLVKDKETGNSKGYAFCVYSDVSVTDIACAALNGIKMGDKTLTVRRASQGTL
QPKPEQESILMHAQQQIALQRLMLQPGGPPTKVLCLTNVVSPDELKDDEDYEDIMEDMRT
ECAKFGSLVNLVIPRPRPDGEPTPGVGKVFLEYADVESSSRAQQGLSGRKFGGNPVVAVF
YAENKFSEGDYEG
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggattccagtgaaaatgggcgatctcagctcactcctagtcatattggtggcgagaat
gagaacgaaatagctggtgtggataacagagaagaagaacacgactcgaggaagagaaga
tcaagctctaagcacagctcccgtgattatgagggcaaaagggagtcttcaagaagcagg
gatagggagagggacaaaggacgtgataaggatagagataggagcaaagagaaggaaagg
gaccgggatcgggatcgggaaaaagatcgcgatcgtcaccacagagatcgaagcgagagg
cgtagaactagagatagagatggtgatggtaacgtttctgatgacggtgctgagagccgg
gaatactggcagaaagattatgatagagatagagacgagaggcacagacataggtcaaaa
tcttatgagagagagcgagaggaagggcatagacacaggtccaaatcatacgacaaggat
agagaggaaagggatagacacaggtcgaaatcctatgacagagatcgagaggaaaggcat
ggacatagatctcactcaagaggaagatctagtcatagatcaagatcgcgttctcgatct
cggtctcgttcacgctccaaaagcaaaaggatcagtgggtttgacatggcacctcctact
tctgctctgttgcctggtgttcctgctgtcccagtttctgcaggtcaactcccaggcact
gccccagctattcctggaatttttcctaacatgttccctttggcatctggaccgcttgga
gctattcctgttatgccagttcaggcaatgacccagcaggcaactagacatgcaaggcga
gtttacgttggtggacttcctccgactgcaaatgaacagtcagtggctacgtacttcaat
catgttatgtcggcaattggtggaaacactgctggtccaggagatgctgtcgttaatgtt
tatataaaccatgagaaaaagtttgctttcgttgagatgagatctgtggaggaggccagc
aatgccatggccttagatggcattatctttgagggaacacaagttaaggtcagaagaccg
actgactataacccctctctggctgcatctcttggtccgagtcaaccaaatccaaacctt
aaccttgctgcagtgggattatcaccaggatccactggtgggcttgaaggtcctgaccgt
atttttgtgggaggcctgccatactatttcactgaagctcagattagggaactgctggag
tcctttggccctcttcgggggtttaatctggtcaaagataaagaaactggaaactcaaaa
ggctatgccttttgtgtctactctgatgtgtcagttacagatattgcctgtgcagctctt
aatgggattaagatgggtgataaaactcttactgtcaggcgtgcaagtcaaggtacttta
cagcctaagccagagcaggagagtatattaatgcatgctcagcaacaaatagcactgcag
agactcatgctacaacctggtggacctcctacgaaagtcttatgcctaacaaatgtggtt
agcccggatgagctcaaagatgatgaagactatgaagatataatggaagatatgagaacg
gagtgtgcgaagttcggtagtttagtgaacttagtcatcccacgcccgaggcctgatggt
gaacctacacctggggttggaaaggtctttttggagtatgcggacgtggagagttcttcg
agagctcaacaagggttgagtggcagaaaattcggaggaaacccagttgttgctgtcttt
tatgcagagaacaagttctcggagggggattacgagggctag

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