Lycium barbarum (goji berry): 132640185
Help
Entry
132640185 CDS
T09483
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00450
Selenocompound metabolism
lbb00970
Aminoacyl-tRNA biosynthesis
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
132640185
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132640185
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132640185
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132640185
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
132640185
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132640185
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132640185
Prokaryotic type
Other AARSs
132640185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
Toprim
Motif
Other DBs
NCBI-GeneID:
132640185
NCBI-ProteinID:
XP_060212648
LinkDB
All DBs
Position
5:3659552..3675167
Genome browser
AA seq
614 aa
AA seq
DB search
MACRVQHSIQNSIYFLSSTPLLNSLNPTTKSYFKNQISFGKKLFSSSSRTALYCTCSTSN
SGNKNSFSSNGVDEFVLTTPLYYVNAPPHMGSAYSTIAADAIARFQRLLEKKVIFITGTD
EHGEKIATAAATNGSSPSEHCDVVSQAYKALWKDLDISYDKFIRTTDPKHEAVVKEFYSR
VLANGDIYRAGYEGLYCVNCEEYKDEKDLLDNNCCPTHLKPCVRRKEDNYFFALSKYQQQ
LEEVLRQNPGFVQPSYRLNEVQGWIKSGLKDFSISRASVDWGIAVPNDSKQTIYVWFDAL
LGYVSALLEDNELASLETAISSGWPASLHLIGKDILRFHAVYWPAMLMSAGIGLPKMVFG
HGFLTKDGMKMGKSLGNTLEPTDLVQRFGPDAVRYFFLREVEFGNDGDYSEERFIRIINA
HLANTIGNLLNRTLGLLKKNCQSTLAVDSYVAAEGNKLKAAVEKLVEKARVHYQNLELSA
ACETVLEIGNAGNLYIDEQAPWSLFKQGEAAFETAAKDLVIVLEAMRIISVALSPITPGL
SLSIYSQLGFTEEQFNAISWSDTKWGGLKAGQVMAQATPIFARIDDGTEAETKSAATKKV
KKEKAPKNKSPVEA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtagagttcaacattcaattcaaaacagtatttacttcttatcttcaacccct
ttactcaattctttaaacccaacaacgaagtcttatttcaagaatcaaattagttttggt
aaaaaattgttttcatcttcttcaagaactgccctttactgcacttgtagtaccagtaac
agtggtaataaaaatagtttttcttcaaatggggttgatgaatttgtactcacaactcca
ctttattacgttaatgcccctcctcatatgggcagtgcttattctactattgctgctgat
gctattgctcgttttcagaggctacttgagaagaaggttatattcatcactggtacagat
gaacatggagagaagattgctactgcagctgcaactaatggttctagcccaagtgaacac
tgtgacgttgtttcacaagcttataaagctctctggaaagatttagacataagttatgac
aagtttatcagaacaactgatccaaagcatgaagctgttgtgaaggaattttactctcgg
gttcttgccaatggtgacatatacagggctggttatgagggactttattgtgtcaattgt
gaggagtacaaggacgagaaggatttgctggataataactgttgtcctacgcacttaaag
ccatgtgttagaagaaaagaagataattacttctttgccttgtcaaagtatcaacaacaa
ttggaagaagttttaaggcaaaaccctggttttgtgcagccttcttatcgtctaaatgag
gtccaaggttggattaaaagtggcctgaaagatttctccatttcccgagcgtcagtagat
tggggtattgctgttcctaatgattcaaagcaaactatatatgtgtggtttgatgctttg
ttggggtatgtatctgcacttttggaggataatgagctagctagtttagaaactgcaatt
tcatctggatggcctgcctcgctccacttaattggcaaggatatattaagatttcatgct
gtttattggccagcgatgttaatgtcagcaggaattggcctccctaagatggtatttggc
catggattcttgaccaaggatggcatgaagatgggtaagtcactaggaaatacactcgag
ccaacagacttggttcagaggtttggacctgatgcagtgaggtactttttcctcagggag
gtagaatttggtaatgacggtgactactcagaggaacggttcatcagaatcataaacgca
catttagctaatacaattggtaatcttctaaatcgcacacttggacttctgaaaaagaac
tgccaatcaactctggcggttgattcatatgttgcggcagaaggaaacaaattgaaggct
gcagtggaaaaactggttgagaaggcacgtgtgcactatcaaaatttggaattatcagca
gcttgtgagaccgtgctggagattggtaatgctggaaatttatacatagatgaacaagca
ccatggagtcttttcaagcaaggggaggcagcctttgaaactgcagcaaaggatctcgta
atcgtattggaagcaatgagaatcatatcggtcgcgctatccccaattacaccaggcttg
agcttgagtatatattcccaacttggcttcaccgaggaacaattcaacgctattagctgg
agtgatacaaaatggggcgggctgaaagccggtcaagtaatggcgcaggcaacgcctatc
tttgccagaatagatgatggaactgaagctgagaccaaaagtgcagcaacaaagaaagtt
aagaaggagaaggcacctaaaaataagagtcctgtggaagcttag
DBGET
integrated database retrieval system
