Lycium barbarum (goji berry): 132645415
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Entry
132645415 CDS
T09483
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132645415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132645415
Spliceosome [BR:
lbb03041
]
Common components
Common spliceosomal components
SR proteins
132645415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RNA_bind
RRM_3
SET_assoc
RRM_5
Nup35_RRM
RRM_8
Motif
Other DBs
NCBI-GeneID:
132645415
NCBI-ProteinID:
XP_060218364
LinkDB
All DBs
Position
6:109656363..109662576
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AA seq
243 aa
AA seq
DB search
MRPLFVGNIEFDTRQSELERLFTKYGRIERVDMKSGFAFVYFEDERDAADAIRSLDNMPF
GYDKRRLSVEWAKGERGRPRDDSKVATNQRPTRTLFVINFDPIRTRVRDIERHFEPYGKI
LNVRIRRNFAFVQFENQEDATKALECTHMSEILDRVVSVEYALRDDGERGDKYDSPRRDY
GRHGDGPYRRSPSPIYRRGRPSPDYGRPRSPAYNKYSGPSYDRYRSPEYGRYRSRSPVRR
SRT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccttattcgtaggaaatattgagtttgatacacgtcaatctgaactggaacga
ttgtttaccaaatatggaagaatcgagcgtgttgacatgaaatctggctttgcgtttgtc
tactttgaggatgagcgtgatgcagctgatgccatccgtagtcttgacaacatgccattt
gggtatgacaagcgccggttatcagtggaatgggcaaagggtgagcgtggtagacctcgt
gatgactccaaggttgcaacaaaccaaagaccaacaagaactttgtttgtcattaacttt
gaccctatccgcactagggtgcgtgacatagaaagacactttgaaccatatgggaagatc
cttaatgttcgcatacgtcgtaattttgcgtttgtgcagtttgaaaatcaggaagatgcc
acaaaagccttggagtgtacacacatgagtgagatccttgacagagttgtttctgtagag
tatgctttgagggatgatggtgagaggggggacaagtatgatagtcccagaagagattat
gggaggcatggtgatggtccttaccgaaggtcaccaagcccaatataccgcaggggtcga
cctagtcctgattatggccgtcctcgtagccctgcttataacaaatatagtggtccgtca
tatgatcgatacaggagtccagagtatgggaggtatcgcagcaggtctcctgttcggagg
tcaagaacttga
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