Laccaria bicolor: LACBIDRAFT_190760
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Entry
LACBIDRAFT_190760 CDS
T01044
Symbol
CHB16201
Name
(RefSeq) SWI/SNF complex protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lbc
Laccaria bicolor
Pathway
lbc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LACBIDRAFT_190760 (CHB16201)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_190760 (CHB16201)
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_190760 (CHB16201)
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
LACBIDRAFT_190760 (CHB16201)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
LACBIDRAFT_190760 (CHB16201)
PBAF complex
LACBIDRAFT_190760 (CHB16201)
GBAF(ncBAF) complex
LACBIDRAFT_190760 (CHB16201)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Flot
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
6077012
NCBI-ProteinID:
XP_001881226
JGI:
190760
UniProt:
B0DBA1
LinkDB
All DBs
AA seq
673 aa
AA seq
DB search
MDTPKRSGSAAPNSSDAKRIKLTVPHQNQGASPVDPENASGKRTELDPIPSGDIGNLTTE
GSLSVPPTDEDGDSADENDDEDPAQLEATRQRLEEQARKYLAAQTHEVIIPSYSAWFDMS
KIHPVERRALPEFFNSRNRSKTPAIYKDYRDFMINTYRLRPTEYLTVTACRRNLAGDVCA
IMRVHAFLEQWGLINYQIDPDQRPAALAPPFTGHFRVLLDTPRGLQSLHPGTRPTNPTVN
GRPVPTGSAAPASLELRSSIYQTTSKASRPISSTEAKTLANANGSVKTNGTVPGATSHSC
DTCGVDCTLVRYHSLKDKKLELCAPCYLDGRFPSTMYSGDFVKLTSAGAGVAQGSGNNDD
WSDQETLLLLEGVEMYDDDWSKIEEHVGTRSAQQCIRKFLELPIEDPYLNTEASMGPLRF
GRIPFEQADNPVMSVVAFLAGVVGPGVAAEAAKTALHELTDGDSKKATAEDKAMIEDEDK
KDEDRMDEDTAVPTKEESVAPSEGAAADAATTSADGTSTASGSQKPKHTLPHSKVVRAAD
LALKASARAAQTLATAEDKQIRSAISNLIKLTLTKLELKMSQFEELEDILEEERKGLESA
RVALVNERLGLKRMLDGVRTEIAKNGITGNVLNSLGQPMGTTGQGVLVGEVSAAQMMESG
GGPMADGAMLQLS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacactcccaagcgttccgggtcagcagcgcccaactcctccgacgcaaaacggata
aaactcaccgtcccccaccaaaaccaaggagcaagcccagtcgaccccgaaaacgcttct
ggtaaacgtacagagctggaccctataccctcaggcgacatcgggaacctaacaactgag
ggctcattatctgtccctccgactgacgaggacggtgattctgcagacgaaaacgacgat
gaagaccctgcacagctagaggctacgcgtcagcggctggaggagcaggcgcgcaaatac
cttgcggctcagacgcacgaagtcatcatcccttcttactctgcttggtttgacatgtct
aaaatccaccctgtggagcgtcgtgcgttgccggagttcttcaactcgcggaatcggtcg
aagacgcccgctatttacaaagattatcgcgattttatgatcaacacgtaccgactacgc
cctaccgagtatctcactgtgacggcttgcagaaggaatttggcgggtgacgtatgcgcg
attatgcgcgtacatgctttcctagagcaatgggggctcattaactaccagattgaccca
gatcaacggccagcagcactcgcaccccctttcacggggcatttccgcgttctcctcgat
accccacgcggtctgcagtctcttcaccctggtactcggcccaccaaccccactgtgaat
ggccgaccggtcccaacaggctcagccgcacctgcgtcactcgaattacgatcttctatc
taccaaaccacctccaaagcctcgcgtcccattagctcaacagaagccaaaactttggcc
aacgctaatggctccgtcaagactaacggcacagtaccaggtgccacctcacacagctgc
gacacttgcggggtagattgtacccttgtccggtaccactccctcaaggataaaaagttg
gagctgtgtgctccgtgctatcttgacggacgattcccctctaccatgtacagtggtgac
tttgtcaagctcaccagcgccggtgcaggtgtggcacaagggagtggaaataatgatgac
tggtcagatcaagaaacacttctcctccttgagggtgtggagatgtatgacgatgattgg
tcaaaaatcgaggaacacgttgggacgcggtcggcgcagcagtgcattcggaagttcttg
gagctgccgattgaggatccatatttgaacacagaggcatcgatgggtccactgaggttt
ggccggataccattcgagcaggcggataaccccgtcatgagcgtcgtggcattcttagct
ggtgtggttggccctggggttgcagctgaggctgcaaaaacagcattacacgaacttacg
gatggggactcaaagaaggctacggcagaagacaaagctatgattgaagacgaagataag
aaagatgaagaccgaatggacgaagacactgctgtccctaccaaagaagagtcagtagca
ccctcagaaggcgctgctgctgatgccgccaccacctcagccgacggtacttccacggct
tcgggctcccaaaaacccaaacacacgcttccccactctaaagtcgtccgcgccgccgat
ctagcactcaaagcctccgcccgcgccgcacaaaccctcgccacagcagaagacaaacaa
atccggagtgcgatctccaacctcatcaaactgacactaacaaagcttgagctcaaaatg
tcgcaattcgaagaactcgaggatatcttggaggaagaaaggaaagggctggagagtgcc
agggtggcgttggtgaatgagcggttggggttgaagaggatgttggatggggtgcggact
gagattgcgaagaacggcattacggggaatgtgttgaatagtcttgggcagccgatgggg
acgacagggcaaggtgtgcttgttggtgaggttagtgcggcgcagatgatggagagtggt
ggggggccgatggcagatggggcgatgttgcagttgagttga
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