Laccaria bicolor: LACBIDRAFT_301408
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Entry
LACBIDRAFT_301408 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lbc
Laccaria bicolor
Pathway
lbc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LACBIDRAFT_301408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_301408
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LACBIDRAFT_301408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
DUF3736
Motif
Other DBs
NCBI-GeneID:
6069783
NCBI-ProteinID:
XP_001873514
JGI:
301408
UniProt:
B0CNH1
LinkDB
All DBs
AA seq
501 aa
AA seq
DB search
MGFRLHSLKNKQNRQKEVLRDSTFKRKTMMRARKWRTAKKMWDIEFVMDVPNRSLDFRQG
SGRPAANRSTSATIPPTQPKAPQPQPSLTTEYTPIQRGGVTPNASFTTPSASAPQLNAAP
LSSGSLTAPSAILASTAQPSSEPAAIQDDGVDPSTLPPVTAPPSHPAIDPTATGVFDGRS
ILEVDLNAMADKPWRRPGSDISDWFNYGFDEISWEAYCYRRRDLGELANVLKTNVINFAG
MPEDQLTALPPEVRTMVMTGATTMMNGAGPGMMGPGVMMDMSGMMGPMSMGMNGDMSMGG
AMMQGMMQDGGQGQQQGVGIIQGSGTPEQGAGAVSMMQDGFNAGAAVGGMMNMGIGGEYG
MQEQNTMVQELYPNMQGSQTVTPAPGAGRGAAQIPFRGRGAPGLRGRGFPGRGRGRGGLY
ADAPPPVPVRPASPLPPGVPTGPRNQNKYKDRDGNAPAVDGLDYGGGKESRRTPSGEPEE
RSSSRKRRSSPGLDDRGSKRR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggctttcggttgcattccttgaagaacaagcagaacaggcagaaggaggttttgagg
gacagcaccttcaagaggaaaacgatgatgagggcgaggaaatggaggacagcgaagaag
atgtgggacatcgaattcgtgatggacgtgccgaatcggtcactcgactttcggcaaggt
tcagggagaccggcagcaaatcggtctactagcgcgacaataccgcctactcaacctaag
gccccccaaccccaaccttcactgacaacggagtatactccaatacagcgaggaggtgtc
actccaaacgcatcatttactacaccctccgcatcagcacctcaacttaacgccgcacct
ctatcatctggcagtttgaccgcacccagtgcgattcttgcttcgaccgcccagccatcc
tctgaacctgctgcaattcaagacgatggggtcgacccctcgacgttgcctcctgtaaca
gcaccaccctcccatcctgcaattgatcccacagctacgggcgtgtttgatggacggtca
atccttgaggtcgacttgaacgcaatggcagacaagccgtggcgtcgacctgggtcggac
atcagcgattggttcaactatggctttgacgagatctcatgggaggcgtactgttaccgc
cggcgcgacctaggggaattggccaacgtgctgaagactaatgttatcaactttgctggc
atgccagaagaccagctgaccgcacttccgccagaggtgcgaacgatggtgatgacgggc
gctacgacgatgatgaacggcgcaggacctgggatgatggggccgggggtgatgatggac
atgtctggtatgatgggcccaatgagcatgggcatgaatggcgatatgagcatgggtggg
gcaatgatgcagggtatgatgcaggatggcgggcaagggcaacagcaaggcgtcggcatt
attcaaggaagtgggactccagaacaaggggctggagcggtgagtatgatgcaggacggg
ttcaatgctggagctgctgtaggtggtatgatgaatatgggtataggtggggaatatggg
atgcaggaacaaaacacgatggtgcaagagttgtatcccaatatgcaaggatcgcaaacc
gttacaccagcacctggtgcaggacgtggtgccgcacaaataccattccgaggtaggggt
gccccaggcttgcggggaagaggcttccccggaagaggtcgtggtcggggaggattatat
gcggatgctcctccaccagtgcctgtgcgacctgcctctccactcccacctggagtgccc
acgggacctcgtaatcaaaacaagtacaaggatcgagatggcaatgcaccagctgtggat
ggcctcgattatggaggtggtaaagaaagcaggaggacaccgagtggtgagcctgaggaa
cgcagttccagccggaagcggaggagctcgcctgggcttgatgatcgaggctcaaaacga
cgctga
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integrated database retrieval system
