Laccaria bicolor: LACBIDRAFT_304430
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Entry
LACBIDRAFT_304430 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_304430
04121 Ubiquitin system [BR:
lbc04121
]
LACBIDRAFT_304430
Enzymes [BR:
lbc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LACBIDRAFT_304430
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LACBIDRAFT_304430
Ubiquitin system [BR:
lbc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
LACBIDRAFT_304430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
FANCL_C
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
6080348
NCBI-ProteinID:
XP_001884842
JGI:
304430
UniProt:
B0DLM0
LinkDB
All DBs
AA seq
1803 aa
AA seq
DB search
MAKGHGKSSATSATKKKHAKKHAGPVDEPIPKEKKPKGKDRGKKKEPKQKIYIAPIKPAP
IQPDPLETTGLAHKLPADLLVVLRSFNKKAQPTKQRALEELQSAWVDKCQKEGEDSPLVY
TLVEMLPVWLHHISALFIHPSRRIRALTASLHTSFLQISPVRDQILFFLRETATPSQLES
ILGTWCIAAHDVDRVVSVSALKAWKDAVGSTTQSHLVLDDGRRASLVAFVQKTALYPSEM
YVHLNPAPPVPPPPPPSKKTSIPTWKDDGEQNSRTKGDEQEEDEQDRKSRLRVGALGVAR
WILENIPSSSEDLKGLLLDPVLWTSLHHAEKCPWAAVEPFGWGQPNVRKAAWALVQTLLT
TQKGHLKPVVPILGPAILRSAWVEPDLAVQTTMWQPLLTFLKEFPNSWELELELTGIIDE
EGESSSEDEREMDERSKPTKPTYASTIGRPSSAYREFLQFLELGCSGSPMQGYPTVIIIL
SSIPSSLIASYSSSPLPDLFKSFWAAIDSRALSSLRRSATSAAFLASLLECMVFLLKRLR
SDESRDGVDAGIIPRSSSETVEGLGQSLVKQEFTRVWNELAVEKLKVEERAAARLLAQTL
ESLYDMNWGLFNSAWSALSEAMRHAEETNSSINLTFSLLKVFYNRFKDGTPLKFAVSELL
VELLISSVDKCRKAFDSGVPKSGSSPFDVLVAALDQFREGLFFDIRFSEPFDNLLSEHTY
KSFTLSPTLVLSYLLHRNDDKKSLGLWHCLLSEIALQGDLALESIPPLLAASRQGHLPTH
LKPKFDELDGLSGALLVKALTGPSGSNELAIVRQLFLSSDHFLSEPGFLALLRSVVEAFT
WQVDSVLRGDKKHDALSLLNFAPSLDLISAVFAQPPKMLPSLDEFDALLPSIFFFAYLLP
LCHGVDDGAHPTFGVARDLWTQWINLASVTQKERAVGVIKAQLKTFITDTQVRPLPEDIL
QLLSQNLPGVRAEIVAEIFPSAAELNEMLAAIPADAIDPSMGVIEPLIPPGFSENEQVSI
TGGTDKRGFSSYARIVDALLRLSTQDRIHAKQNLWALRHFIVLSVYARDFQSVSAPVRPS
PVFAATSALAGVGEAFGRVDQMTAYLLLSSNDEQWRIKTLNAFLSGMKEELVGLSAFLMD
VISYAKEGDGVRDTRVLSVVLDRILGDIDVEEADMWIQLARKLERLAPQTAMTIAAAIAA
TGTEPQKLDRYRNELAASLLGIRSDINGQGLLTLRKLAATAPDPDSEVVFLPQVRAVNVV
KVFQQWVASDDEDVGEDVESAMIHVYIHLTPILQNLAGNHWEFIFDVLESVLENSQITDD
EALVPLANALRLIIVLQDLTVTNKLLKADWDERSSVLLTMVRDIAQIRSDAAAASLPRST
CRELTLSIVHKLPPSLIDHDTLANVCLFTRHPCHFVHDAVCQMSHLITDSSVDVQKMAYQ
LLRVAARKRTEYLVIEAAAAAVTEAEREEETPVVQEIKAAGLIPAELLDIVQGEARHFVI
DDDDDDDELSLFGWMLGWMLIFDLFTDASFKIKSGYVEQLRNSNLIVTQFIPTLLGLLRL
DEGLPKVFKCDSWFVDEFYIELYETGTPSITLRVLAAHLFYRALLCVPSLIHTWVLDCKD
RQLTYCVTTYTSTYFSPVLIRAELAHVRSPEAQAELADENLSVKVSMALNEVVASYLVDE
HQLEIKLKIPVDWPLHRIEVKDTKPRGVDEDRWRAWVLAVQQTIWAHNGRITDGLGLFKK
NVTLHFEGQVECAICYSIISVMDGSLPKKPCKTCKNRFHAGCLYKWCNSSHSSSCPLCRS
DII
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggtcatgggaaatcctctgccacctctgctacgaaaaagaaacatgctaaa
aagcatgctggtccggtagacgagcccattcccaaggagaagaaacccaaaggcaaggac
agggggaagaaaaaagaacccaagcaaaagatatacattgctccaattaaaccagccccc
atccaaccagatccccttgaaaccactggtctcgcgcacaaactccctgccgatctgctt
gtcgtactacgcagtttcaacaagaaagctcaacccaccaagcaacgcgcgttggaggag
ctacagtcagcatgggtcgacaagtgtcagaaggagggtgaggatagtccacttgtctat
acgctggtggagatgttgccagtgtggctgcatcacatatcagccctttttatacatcct
tctcgcaggatccgcgctctgacggcctcgttgcatacatcttttctccaaatctctcct
gtacgggaccagatcctcttcttcttacgtgaaacggcaacaccctctcaattggagagt
atcctggggacgtggtgcatagccgcacatgatgttgatagggtagtctcggtttcagca
ctgaaggcgtggaaggacgctgttggctcgactacccagagtcatcttgtgttggatgat
ggccgccgtgcgtcgcttgtagcattcgtgcaaaaaacagcactgtatccttctgagatg
tatgtacatcttaatcctgctcctcctgttccaccaccacccccgccgtcgaaaaaaacc
tcaatcccgacgtggaaggacgacggtgaacaaaactcgcggacaaagggggatgaacaa
gaagaggatgaacaggaccgcaaatcaagattgcgcgttggcgcacttggtgtcgctaga
tggatcttggaaaatattccatcgtcgtctgaagatctcaaggggcttttacttgatcca
gtgctctggacatctttgcatcatgcagaaaagtgcccttgggcggccgtcgaacccttt
ggatggggccaacccaatgttcgcaaagctgcttgggcgcttgtccagacacttcttacc
actcaaaaagggcatttgaagcccgtcgttccgatcctgggtccagccatcctgcggtca
gcctgggtggaaccggatctggccgtacaaacgaccatgtggcaaccattactcaccttt
ttgaaggaatttccaaattcctgggaactcgaactcgaactcacaggaatcatagacgag
gaaggcgagtcgagctcagaagacgagagggagatggatgagagaagtaaaccgacaaaa
ccaacatatgcatcgacgatcgggcgaccctcgtctgcttatcgagaattcctccaattt
ttggaattggggtgttcgggatcgccgatgcaaggctaccctacagtcatcataattctc
tcatccatcccatcttcgctcatcgcgtcatattcctcttccccattacccgacctcttc
aaatccttttgggcagctattgacagtcgcgctttgagttctctacgccgatcagcaacg
tctgctgcatttctcgcgtcccttttggaatgcatggttttcttgcttaagaggctcagg
agtgacgaatcgcgcgacggggttgatgctggaatcatcccgcgttcatcctcagaaaca
gtcgaaggtcttggtcaaagtttggtcaagcaggagttcactcgtgtctggaatgaactg
gctgttgagaagctgaaggtcgaggagagggctgccgcgagactcttagcacagacgttg
gagtctttatacgacatgaactggggactgttcaactctgcatggagcgccctctcagaa
gcaatgaggcatgccgaagagacgaactcgagcataaatttgacattcagcctgctgaag
gtcttctacaaccggttcaaagatggaactcccttgaagtttgctgtatctgagctcctg
gttgagttattaatatcatccgttgacaaatgcaggaaagcattcgattctggtgtacca
aagagtggcagtagccctttcgatgtgctcgttgccgctcttgatcaatttagggaaggc
ttgttcttcgacatcagattttctgagcctttcgataacctactctctgaacatacctac
aagtcgttcacgttgtcaccgacgcttgtgctttcttatctccttcatcggaatgatgac
aagaagtctctcggactctggcattgcctcctttcagaaatagctctacagggcgacttg
gcgctagagtcgatccccccgctgcttgcagcctcacgacaaggccatctcccaacccat
ctgaagccgaaattcgacgaactcgatggtttatctggggctcttcttgtcaaggccttg
accggaccttcaggatcgaatgaattagccatcgtacgccagctattcctgtcatcggac
catttcctatccgagccgggtttccttgcccttcttcgcagcgtcgtggaagcattcact
tggcaggtcgactccgtacttcgaggcgacaaaaagcacgatgccttgtctttgctaaat
ttcgccccttcgttagacttgatttccgctgtctttgcgcaacctcccaaaatgctgccc
tcgctggacgaatttgatgccttgcttccaagcatcttcttttttgcttatcttctgcca
ttgtgccacggcgttgatgacggtgcccatcctacctttggcgtggcccgggatctttgg
acccagtggatcaatttagcttcggtaacacagaaggaaagggctgttggggtcatcaaa
gcacagttgaagacattcatcacagacactcaagttcggccactaccagaagatatcctt
cagctgttgtcccaaaacttgcctggggtccgggccgagattgtcgctgagatattccca
tcggccgcagaattaaacgagatgcttgcagctatacctgcagatgcaatcgatcccagc
atgggagtgatcgaaccactgattccccctgggttctcagaaaacgaacaggtttctatt
acgggcgggacagacaaacgtggcttttcctcatatgcccgcatcgttgacgccctgctg
cgactatccacgcaagatcggatccacgcgaaacaaaacctctgggcactgcgccacttc
atcgttttgtctgtctacgcacgcgatttccagagcgtatcagctccagtacgtccaagt
ccagtctttgctgccactagtgcgttagcaggggtgggtgaagcttttggaagggtggat
cagatgacggcatacctccttctttccagtaacgacgaacaatggaggattaaaacgctg
aacgcttttctgagcgggatgaaggaggagcttgtggggttgagcgcctttttgatggac
gtgatttcttatgcgaaagaaggtgatggtgtgagggacacaagggttttgagcgttgtg
ctcgatcgcattcttggcgacattgatgtggaagaggctgatatgtggatacaactagca
aggaagttagaacgtcttgcaccacagactgcgatgaccattgcagcagctattgctgcc
actggaactgaaccccaaaaacttgaccgctatcgcaacgaacttgcagcctcgctcctt
ggtatccgaagtgatatcaacgggcaggggctgctgacactgcgaaaactagccgcaacc
gcaccagatcctgactcagaagtagtatttctgccacaggtacgggcagtgaacgttgtc
aaagtatttcagcagtgggttgcgagcgatgatgaagatgttggagaggacgtagagagt
gcaatgatccacgtctacattcacctcactccaatactccaaaatctggccggcaatcat
tgggagttcatctttgatgttttggaaagcgtacttgagaactcacaaatcacggatgac
gaagcgcttgtgccgctcgccaatgctctgcggttgataatcgtgttacaggacctgaca
gtcactaacaagctcctcaaagcggactgggatgaacgtagtagcgtgctattgacgatg
gtaagggatatcgcccaaattagatcagacgccgcagctgcatccttaccacgctcaact
tgccgcgaactcactttgtcaattgtgcacaaactgccaccttcgctgatagatcacgat
acattagcaaatgtttgccttttcactcgtcacccatgtcatttcgttcacgacgccgtt
tgtcagatgtcacatctcattacagactcgtccgtcgatgtccagaagatggcgtatcag
ctacttcgggtcgctgcgagaaagcggacagaatatctagtcatcgaagcggcagcggcc
gccgtcactgaggccgaacgcgaagaagaaacgcctgtggtacaggagataaaagcggct
gggttgattcctgcagagcttttggacattgtgcaaggggaggcaagacatttcgtcata
gacgatgacgatgacgacgacgaattgagtttgttcggctggatgttgggatggatgctc
atctttgatttattcacggatgcgtccttcaaaattaaatcgggctacgtcgagcagctc
aggaattcaaatctcatcgtcacgcaattcattcccacattgttaggtctcttgcgactg
gatgaaggattgcctaaagtgttcaaatgtgactcctggtttgtggatgagttttacatt
gaactttatgaaactggaacaccatccattaccctccgcgttctcgctgcacatctcttc
taccgagccctcctttgcgtcccctcgcttattcatacctgggttttggactgcaaagat
agacaacttacatactgcgtgacgacctacacttcaacatatttctcacctgtgctcata
cgtgccgagctcgcacacgtccgttcacctgaagcacaggccgagctggcggacgaaaac
ttgagcgtcaaggtatcaatggcattgaacgaggtcgtggcttcgtaccttgttgacgaa
catcagctggagataaagctcaagattccagtggattggcctttgcataggattgaagtc
aaggatacgaaacccagaggtgtggatgaggatcggtggagagcatgggtgttggctgtt
cagcagacgatttgggctcataatgggcgcataacggacgggctaggtctgttcaagaag
aatgtaacattgcactttgaagggcaagtagagtgtgcgatttgttattcgatcatcagc
gtcatggatggcagtttgccaaagaagccttgtaagacgtgtaaaaatcgatttcacgcg
gggtgtttatacaagtggtgcaattcaagtcattcatcaagctgtccactgtgtcgatcg
gatatcatctag
DBGET
integrated database retrieval system
