Laccaria bicolor: LACBIDRAFT_305524 Entry LACBIDRAFT_305524 CDS       T01044                                  Definition (RefSeq) DNA ligase IV   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism lbc  Laccaria bicolor Pathway lbc03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:lbc00001]  Genetic Information Processing   Replication and repair    03450 Non-homologous end-joining     LACBIDRAFT_305524 Enzymes [BR:lbc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      LACBIDRAFT_305524 DNA repair and recombination proteins [BR:lbc03400]  Eukaryotic Type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      LACBIDRAFT_305524 SSDB Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C RNA_ligase BRCT PTCB-BRCT LIG3_BRCT Other DBs NCBI-GeneID:  6070492 NCBI-ProteinID:  XP_001874645 JGI:  305524 UniProt:  B0CUG3 LinkDB AA seq 1059 aa MMQPTPAPSSAPNSPERKLEPLAESQTYPAPPQNVGSAPFGVLVGLFDKLQVERKQDRRR KLIETWFNHWREEKGYDLYPVLRLILPQKDRERAVYGLKEKNLAKTYIKLIPLGMRDPDA IRLLNWKKPTEREKTSGDFPTVLYEVVSKRSSVIEGSLSIDELNDILDELAKNMGKQDIQ SGILRRIYNRSTAQEQRWIVRIILKDMIISVKETTIFSVFHPDAQDLYNTCSDLKKIAWE LWDPSFRLNAEDKAVQLFHAFAPMLCKRPTKKIEETVREMSGSEFFIEEKLDGERMQLHK RGNEYLYFSRKGKDYTYLYGKHVGTGSLTPFIDKAFDPRVDDIILDGEMLVWDPVSERNL PFGTLKTAALDKSKKEHNPRPCFKVFDLLYLNGQSLLHKSTAFRKKNMRNCLKEITGRIE YAVDYKGTTAKDIRKRMDEVMGNRGEGLVIKHPLSKYVLNGRNMDWIKVKPEYMDNMGET VDVLVVAGNYGTGKRGGGVSTLICAVLDDRRANEDDEEPKYSTFVRIGSGLSFADYVWVR DKPWKVWDPKHPPEFLQTAKRTHEDKGDLYLEPEDSFILKVKAAEITPSDQYHMGFTMRF PRALSIRDDLSIADCMTATAVFESLRSEKKRKMESDAGVSSKKRKTTAKKATVLPAYKGP NLKGVRVKTDILDGLKFGELLASCSIYQVLIRLTPVVMADPKSRTGDEERKELMKLIHAN GGSCAQVANNQPELFIVYEGNTIPYDLKLLIDKNVYDVIKPNWITDSVALGEPAPLRKKY FFRATDERASTDEYMQEDEDQAFEAPTLKEDPSAKLEEEMVPKVEEQEYDIDPSLADWLK IDDKNEKLHAEAKEEQDDYSATDDDSDNADVLEPEEVDLDDWLKVESADEPSVIASAATG SESLSTDCVDVKMGETEAAMEYDQDLIFKHLCFYLDSPENAQRNQMIVKTRYEKDIKQRH VVVLRVCIEPVTDCAPPSFVDLSKVIADNGGKIVDLDEPKLTHIIIDKRDDSRRLELMKR TSKRRLIISEYVQACLDEGTLLDEDGAYHFRDDRRGCLT NT seq 3180 nt   +upstreamnt  +downstreamnt atgatgcaaccaactcctgctccatcttccgccccgaattctccagaacggaaacttgaa cccttagcagagtcacaaacatatcctgcgccccctcagaatgttggaagtgcacctttt ggagttcttgttggtctctttgacaagcttcaagttgaaaggaaacaggacaggcggagg aagttaatcgagacgtggttcaatcactggcgtgaggagaaaggatacgatctttatccc gtcttgcgtttgattctacctcagaaagaccgagaacgtgctgtctatggcttgaaagag aaaaatcttgcgaaaacctacattaagttgattcctttgggcatgcgagatcctgatgcc atccgtcttttgaactggaagaaaccaactgaacgagaaaaaacctcaggagattttccg actgttctgtacgaggtcgttagcaagcggtcctccgttattgagggatctttgtctatt gacgagttgaatgacatccttgacgaactggccaaaaatatgggcaaacaagacattcag tcgggtatcttgcgacggatatacaaccgttcgacggcccaagagcaacgctggatcgtt cgtattatattgaaagatatgatcatatctgtaaaggagaccactattttttcagtgttt cacccagatgctcaggacctatacaatacttgttccgatctcaaaaagattgcatgggaa ctttgggatccttccttcaggctcaacgcggaagataaagcagtccagttatttcatgct ttcgcgccaatgttgtgtaagcgtccaacgaagaagatcgaagaaactgtccgagaaatg agtggttccgagttctttatagaggagaaactcgacggagagaggatgcaactgcacaag agaggcaacgaatatttatatttttctcggaaaggaaaggattacacatatctgtatggg aaacacgttggcacgggaagcttgactccgtttatagacaaggcctttgatcctcgagtg gacgatataattttagacggtgaaatgctagtttgggatcctgtgtctgagcgtaatcta ccgttcgggacattgaagacggcagcactcgacaagtctaagaaagagcacaacccgcgc ccttgtttcaaagtttttgatcttttgtacctgaacggtcaatcccttctccataaatcg acagcttttcgaaagaagaatatgcgaaactgcctcaaggagatcaccggaagaattgaa tatgcggtcgactacaaaggcactaccgcgaaagacatccgaaaaagaatggacgaagtg atgggtaaccgcggtgagggcttggttatcaaacatccgttatccaagtacgttttaaat ggaaggaatatggattggatcaaggtgaaacccgaatatatggataatatgggagaaact gttgatgttctcgttgttgccgggaactatggaactggaaagcgtggtggaggcgtttca acgctcatctgtgctgtcttggatgaccgccgagcaaacgaggatgacgaagagccaaaa tacagcacctttgttcgtatcggttctgggctgtccttcgccgactacgtttgggtgaga gataaaccatggaaggtctgggatccaaagcatccccccgaattccttcagactgccaag cggactcatgaagacaagggagacctctatctagaaccggaggattcatttatactgaaa gtcaaagctgctgagatcacgccgtcagatcaatatcatatgggctttaccatgcgattc ccccgtgccttatccatccgagacgacttaagcattgcggattgcatgactgctacagct gttttcgaaagcctgcggtcggagaagaagcgcaaaatggagagcgacgcgggagtatcc tccaagaaacgcaaaacaacagcgaaaaaagcaactgtcctcccagcatataagggccca aatttgaagggagtacgagtaaagacggatatcctggatgggctaaagtttggcgagctc cttgcttcctgctccatctatcaggtgcttatacgccttactccagtggttatggcggat cctaaatccagaacgggtgatgaagaaaggaaagaactgatgaaattgattcacgccaac ggcggatcctgtgcccaagttgccaataatcaaccagaattgttcattgtatatgagggc aataccattccgtatgacttgaagctgctgatcgacaaaaatgtgtacgatgtgataaag ccaaattggatcacagattcagtggctctaggcgagcctgctcccttgcgcaaaaaatat ttctttcgtgcgacggacgagcgggcatcgacggatgagtacatgcaggaggacgaagac caggccttcgaagcacccacgctcaaagaagacccgagtgcgaagctcgaggaggaaatg gttccaaaagttgaggaacaagaatatgacattgatccctcgttggcagattggctcaag attgatgataagaatgaaaagcttcatgcggaggccaaggaggaacaggatgattattcc gcaactgacgacgattccgacaacgctgacgttttggaaccggaagaggtggatctggat gactggctcaaagtggaatccgcggatgagccttctgtcatagcttctgcagctacagga agtgaatcactgtctaccgactgtgtggacgtgaagatgggagaaacggaggccgcaatg gaatacgaccaagatcttatcttcaagcatctatgcttctacctcgactctccagaaaac gctcagcgaaaccagatgatcgtgaaaaccagatacgaaaaggatatcaagcaaaggcat gttgtggtcctccgtgtgtgcattgagccagtgactgattgtgcaccgcccagctttgtc gacctctcaaaagtgatcgccgataacgggggaaagattgtcgacctcgacgaacccaag ctgactcatattattatcgacaagagggacgacagtcggcgcttggagctcatgaagcgc acatcgaaacgacgtctgattatatcggagtacgtgcaagcatgcttggacgaagggaca cttcttgacgaagatggtgcgtatcatttccgggacgaccgacgagggtgtctaacgtag

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