Laccaria bicolor: LACBIDRAFT_311221
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Entry
LACBIDRAFT_311221 CDS
T01044
Name
(RefSeq) vacuolar assembling protein VPS41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
lbc
Laccaria bicolor
Pathway
lbc04138
Autophagy - yeast
lbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
LACBIDRAFT_311221
04148 Efferocytosis
LACBIDRAFT_311221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_311221
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
LACBIDRAFT_311221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Vps39_1
WD40
Vps39_2
zf-RING_5
zf-RING_2
zf-RING_11
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
6072051
NCBI-ProteinID:
XP_001876887
JGI:
311221
UniProt:
B0CZH3
LinkDB
All DBs
AA seq
1000 aa
AA seq
DB search
MASQGTSNGLAPVILNGHADHDEKHEEVPPRLSSSPAPLTDDEAEEGVGEQSESVATDDE
EEDEEDDEEEEDEDEEPSLKYERIGGSLPDLLKKDSGSAITVCNKHLAMATHAGIIHILD
LTGKRIKSYKPHLASVVDISFDETGDFVATASIDGQVVVHSLSTPEAYAFDMKRPMRTVA
MEPNFARRSTRAVVYGGLAGTLVLREKGWLGHKETTLHTGEGPIWQVRWRSRLIAWANDQ
GVKIYDTVSQTRITYIDRPPDSPRADLFKCTLYWQDDSTLLIAWADHIKVARIRARPRIN
TTAATANLPPFVIEITAALQVDCMISGVVPHPTPIPPVSISPLDGFPSSTTAPQTLTSFL
IIAYSPPETFVDEMTEDRARQARKAAERPELRIISRAGEELAADALSIADYQHWGCNDYS
LAVVGGTDESTEGRSYVILSPKDLVIVKPRDKMDHVKWLVERRRYEEALEEVEKIEAEAV
GGPGKEALDGLSVLEIGKKYMEYLVNEGDFLKAAKLTPKVCAHDPKIWEGWIFVFADKRQ
LQAIIPFVPTEHPRLDHVVYEMMLAHFLTHNRQMLLQTIKEWPWEIYDIPAVIVAIRAEL
DKSASTSTSISSAPSAVVLMECLAELYTANRQPGKALPFYLRLRRPNVFDLIREHNLFTD
VQDQVLLLVEFDHELMEKRKKEGLPNADHSDAIKLLVDNIHSIPIARVVQQLQKRPYYLF
LYLDALVEKDPQLVSGFADLQVQMYAEFATPRLIDFLRASNYYNLETAYNECKGRDLVPE
MVFLLGRMGNNKKALTLIIERLGDVHRAIDFAKEQSDDDLWEDLLMYSETRPAFIRGLLE
NIGVEISPIRLIRRIKNGLEIPGLKEALIKILQDFHLQISLLEGCQTIMDGDSLDLSRAL
QRKQSSGFFLSAKTLCPICSKSLQDTPQSLTLLFLCRHVVHATCAYGGDKIPLLSDPIAR
GFGGSSSRGITGSIAFESMIRGRLSQGCPVCHKSGERVRV
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcaaggtacctcaaacggtttagccccagtaatactcaatggccatgccgat
cacgacgagaaacacgaagaggtcccgccaagattatcgagtagccctgctccgctgacg
gatgatgaggctgaggagggtgtgggagagcagagtgagagtgtcgccacagacgacgag
gaggaagatgaggaagacgatgaggaggaggaagatgaagacgaggagccgtcgttgaaa
tacgaacgtataggcggctctttacctgaccttctcaagaaggactctggttctgctatt
acagtgtgcaacaaacacctggcaatggctacacacgcagggataatacacatcctcgac
ctcacaggaaagcgcataaagtcatacaaaccccaccttgcatccgtagtcgacatctca
ttcgacgagacaggcgatttcgtcgccactgcgtccattgacggacaggtcgtagtccat
tctctatccacacccgaggcatacgcctttgatatgaagaggccaatgcgaaccgttgca
atggagccaaactttgcgagacggagcacacgagcagtggtttatgggggtttggctggg
acgctggtgctgcgagaaaaggggtggctcgggcataaagaaacgactcttcatacgggc
gaagggccaatttggcaggttaggtggagatcacggttgattgcttgggcgaacgatcag
ggcgtcaagatttacgacacagtatcacagacacgaataacatacatcgaccgaccacct
gatagcccccgcgcagatctcttcaagtgcacactctactggcaagacgactccaccctc
ctcatcgcatgggcagaccacatcaaagtagccagaatccgcgccagaccacggataaac
accactgcggccactgcgaacctccccccattcgtgattgaaatcacagccgcgcttcaa
gtggattgtatgatctctggcgttgtacctcatcctacacccattccccctgtatcaata
tcacctctggacggattcccgagttcaacgacggccccacaaacacttacgtctttcctc
ataatcgcttacagcccaccagaaactttcgttgacgaaatgacggaagatcgggcgagg
caagcgcggaaagcagctgaacgacccgagctgcgcatcatctctcgggcgggggaagag
ctcgccgctgatgcgttgagtatcgcggactatcagcattgggggtgtaatgactattca
ctcgctgttgttggtggcacggacgagtcgactgagggtcgaagctacgttatccttagc
ccgaaggatttggtgattgtgaaaccgagggataagatggatcatgtcaagtggttggtg
gagaggaggaggtatgaggaggctttggaagaggtggagaagattgaggctgaggctgtt
ggtggtcctggtaaggaagctctggatgggttgagtgttttggagattgggaagaagtat
atggagtatctcgttaacgaaggcgattttctgaaagctgcgaagctcactccgaaagtg
tgtgctcatgatccgaagatttgggagggttggatattcgtgtttgcggataagagacag
ttacaggcaataattccgttcgtaccgaccgaacatcccagacttgatcatgtagtttac
gagatgatgcttgcgcatttcttgacacataatagacagatgctccttcagacaatcaaa
gagtggccatgggagatctacgacattccagctgtcatagtcgctatccgtgcagagctc
gacaaaagcgcatcaacatcaacaagtatctcgtctgcgcccagtgcagttgtattgatg
gaatgtcttgctgaattgtacacggcgaatcgtcaaccaggcaaagcactcccattctac
ctccgcctccgacgacctaacgtctttgatcttatccgagaacataatctattcacggac
gtgcaagaccaagtcttgcttcttgtcgagtttgaccatgagcttatggagaagcggaag
aaggaggggctgccgaatgctgatcatagtgacgcgatcaagttgcttgttgataatatc
cattcgatacctatcgcgagggttgttcagcaacttcagaagaggccttattatctcttt
ctttaccttgatgcacttgtggaaaaggacccccagcttgtctcgggttttgctgatttg
caggtgcaaatgtacgcagagtttgctacgccacggctgattgactttttgcgagcaagt
aattactataacctggaaacggcgtacaacgagtgcaaaggacgagaccttgtcccagag
atggtctttcttttaggtcggatgggaaacaacaagaaggcactgactcttatcattgaa
cgactaggagacgttcatcgggccatcgactttgcaaaagagcagagcgacgacgatcta
tgggaagatctactaatgtactccgaaacacgaccagcattcatccgcggcctcctcgaa
aacatcggcgtcgaaatcagccctatccggctcatccgccgcatcaagaacggactcgag
attcccgggttgaaagaggccttgatcaagatcctgcaggatttccatcttcagatctct
ttgctggagggatgtcagacgataatggatggggatagcttggatctgtcgagggcgttg
cagaggaaacagagtagtgggttcttcctctctgcaaagacgctatgtccgatatgttcc
aaatctctacaagatacacctcaatctttaacactccttttcctctgccgacacgtcgtc
catgcaacatgtgcgtatgggggcgataagataccgcttctttcagacccgatagcaaga
ggctttggggggtcgtcttcgagagggataacggggagtatagcgtttgaatctatgatt
cgtggtcggcttagccagggttgtccggtgtgtcataagagtggggagagggttcgggtg
tga
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