Bombilactobacillus bombi: DS830_01825
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Entry
DS830_01825 CDS
T06522
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DS830_01825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_01825
Enzymes [BR:
lbm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DS830_01825
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DS830_01825
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DS830_01825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
DUF6671
HscB_4_cys
Auto_anti-p27
DZR
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
AXX64277
UniProt:
A0A347SQG8
LinkDB
All DBs
Position
347320..348150
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVRRGLNQLIKGAKISDINIRYDKIIVGSTTDFKQQLIGATIVEVSRRAKYL
LFHFDNNLTMISHLRMEGKYQVRDSQSEFDKHVHVIFCLEDGRFLGYRDVRKFGKMQLVD
RSTEMQVKSIAALGPEPLTPQYTLASLQQGLQKKKKSIKATLLDQHVVSGLGNIYVDEVL
WRAKIHPEEPANKVTAAQITDLYPIINDEIKTAIAAGGTTIRSYVDATGHQGNFQLQLNV
YKQEGNPCARCGTPIEKIKVAGRGTHFCPHCQVLNQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaagttgaaactgtgcgccgcggattaaatcaattaatcaagggc
gccaaaattagtgatattaatattcgctatgacaaaatcattgttggttcaacaacagat
tttaaacagcagttaattggggcgacaattgttgaagtgtcacgcagagccaaatatttg
ttatttcattttgataataacttgaccatgattagccatttgcgcatggaaggcaaatat
caagttcgtgattctcaatcagaatttgataagcatgtgcatgtgattttttgcttggaa
gatggtcgttttctagggtatcgggatgtgcgcaagtttggtaagatgcaattagtagac
cgtagtacagaaatgcaggtcaaatctattgcagcactaggaccagagccactgacaccg
caatacacattggcatccttacagcaaggattacaaaaaaagaaaaaatcaattaaagct
actttgttagaccaacatgtggtttcgggattagggaatatttatgttgatgaagttttg
tggcgcgcaaaaattcatcccgaagaaccagctaataaggtgaccgcagcacaaattaca
gatttgtatccaattatcaatgacgaaattaagacggcaattgctgctggaggcacgact
attagaagttatgtagatgccactggtcatcaaggaaactttcaactgcagttaaatgtc
tataaacaagaaggtaatccttgtgcgcgctgtggtacacccattgaaaaaataaaagtg
gctggccgtgggactcatttttgtcctcattgtcaggtactaaatcaataa
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