Levilactobacillus brevis ATCC 367: LVIS_1697
Help
Entry
LVIS_1697 CDS
T00406
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit/160 kD subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lbr
Levilactobacillus brevis ATCC 367
Pathway
lbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LVIS_1697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbr03021
]
LVIS_1697
03400 DNA repair and recombination proteins [BR:
lbr03400
]
LVIS_1697
Enzymes [BR:
lbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LVIS_1697
Transcription machinery [BR:
lbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LVIS_1697
DNA repair and recombination proteins [BR:
lbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LVIS_1697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABJ64772
UniProt:
Q03PV0
LinkDB
All DBs
Position
complement(1653057..1656704)
Genome browser
AA seq
1215 aa
AA seq
DB search
MVDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVLDPGNTPLEKKQLLSERDYRDKLLEYGSDAFKAEMGAEAIKKLL
MSVDLDKEVTELKEELKEATGQKRTRAVRRLDILEAFVMSGNRPEWMVMDAIPVIPPDLR
PMVQLEGGRFATSDLNDLYRRVINRNSRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPSLKFNQMGLPV
PMALELFRPFIMKELVARGLASNIKNAKRQIDREDDDVFNVLEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHI
LAPASGKPVVAPSQDMVIGNYYLTMEEANREGEGMIFTDLDEATLAYRNGIVHWHTRVGV
QVTSMPDKPFTDEQRSKIMVTTVGKLIFNNILPKSFPYLNEPTSTNLNGYVPDKYFLEPG
EDIHDYLQNAEIIPPFKKGFLSDIIAAVYQQYKVTATSELLDRIKDLGYNESTKSGLTVG
MVDVTDLKEKPEIIAAAHKQVSTVTKQFRRGLITDHERYERVIGIWNDAKDEIQNALIHS
FDQQNPIFMMSDSGARGNISNFTQLAGMRGLMAAPSGDIMELPITSNFREGLTVMEMFIS
THGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREKDCGTDRGLKIRAITDGNEMIEPL
YDRILGRYTQKTVYDPQTGDVIVPKNQMIVEDTAQQIVDAGVEEVTIRSAFTCNTEHGVC
EHCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNEDITQGLPRVQE
LFESRNPKGKAEITEVTGTVESIEENPAERTKEITIKGEADTRSYTLPITARMRVSEGDF
IHRGGALNYGSVDPKELLRVRDVLSTETYILGEVQRVYRMQGVAISDKHVEIMVRQMLRK
VRIMDPGDTDVLPGTLMDIQDFRRANYQTLIDGGIAATARPVILGITKAALETNSFLSAA
SFQETTRVLTDAAIRGKNDPLVGLKENVIIGKIIPAGTGMPDYRQIKPKEVGGTSTEGVY
SISDLEKQMQEDSQA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatgtcaataagttcgaaagcatgcagatcgggctggcttcacctgataagatc
cgtagctggtcttacggggaagttaaaaagcctgaaaccatcaactaccggacattaaag
cctgaaaaagatgggctgttcgacgaacgtatctttggtcctaccaaggactgggaatgt
gcctgtggaaagtacaagcgaatccgttacaagggtgtcgtttgtgaccgttgtggggtc
gaagttacccgttctaaagttcgccgtgaacgaatgggtcatatcgaactcgcagcccca
gtgacccacatctggtactttaagggaattccaagtcgaatgggcttggttctcgacatg
agccctcgagcactggaagaaattatttactttgcatcttacgtagtcttagatccaggt
aacacgccactcgaaaagaagcaattgctttccgaacgtgattaccgtgacaagctgctg
gaatacggcagtgatgcctttaaggctgaaatgggtgcggaagccatcaagaagttattg
atgagcgtagacctagataaagaagtcacagagttaaaagaagaattgaaggaagccact
ggtcaaaaacggacgcgagccgttcgtcgtttggacattttggaagcctttgtgatgtcg
ggtaaccgtcctgaatggatggttatggatgccattccggttattccacctgacttacgg
ccaatggtacaacttgaaggtggacggttcgcaacgtctgacctgaacgacttgtaccgg
cgggttatcaaccggaacagtcggttgaagcggttgttggatttgaatgcacctggtatt
atcgttcaaaacgaaaagcggatgttacaagaagccgttgatgcgttgatcgataacggt
cgtcgtggccgaccagttgctggcccaggtaaccggccactgaagtctctttcacacatg
ttgaaagggaagcaaggtcgtttccggcaaaacttgttagggaagcgggttgactactct
ggtcgttccgttattgacgttggtccttccctgaagtttaaccaaatgggtctgccagtt
ccgatggctttggaattattccggccattcattatgaaggaattggttgctcgtggcttg
gcttctaacattaagaatgctaagcgacaaattgaccgtgaagatgatgatgtctttaac
gtattggaagatgtcatcaaggaacacccagttctgttgaaccgggcccctacgcttcac
cgtttagggattcaagcgtttgaaccggtcttggttagtggtaaagcaatgcggttgcat
ccattggcttgtgaagcttacaatgccgatttcgatggggaccaaatggctatccatgtg
ccattatctgatgaagcacaagcagaagctcgtttgctgatgcttgctgcgcaccatatc
ttggcccctgctagtggtaagccagttgttgcgccttctcaagatatggttattgggaac
tactacctgacaatggaagaagctaaccgtgaaggtgaaggcatgatctttacggatctt
gacgaagcaacgttagcttaccgtaacgggattgtgcattggcatactcgggtcggtgtc
caagtgacctcgatgccagataagccatttaccgatgaacaacgtagtaagattatggtg
acgaccgttgggaagttaatcttcaacaacatcctgccaaagtctttcccatacttgaac
gaaccaacgagcacgaacttgaatggttacgtccctgacaagtacttcttggaaccgggc
gaggatattcatgattatctgcaaaatgcagaaatcattccaccatttaagaagggcttc
ttgagtgacatcattgcggccgtttaccaacaatacaaggtgacggcaacgtccgaactg
ttggaccggattaaggacttgggttacaacgagtcaacgaagtctgggttaacggttggg
atggtcgatgtgaccgacttgaaagaaaagccagaaatcattgcggctgctcataaacaa
gtcagcacagtgacaaagcaattccggcgtgggttgattacggatcatgaacgttacgaa
cgggttattggtatctggaacgatgctaaggacgaaattcaaaacgccttgattcacagt
ttcgaccaacagaacccaatctttatgatgagtgattctggtgcccgggggaacatttct
aactttacccaattggctgggatgcgtggcctgatggctgctcctagtggggatatcatg
gaattgccaatcacgtctaacttccgtgaagggctgactgtgatggaaatgttcatttca
acccatggggctcgtaaagggatgaccgatacagccttgaagactgccaactcaggttac
ctgacgcggcggttggttgatgtggcgcaagatgttattattcgggaaaaggattgtgga
actgatcgtggtttgaagattcgggccatcactgatggtaacgaaatgatcgaaccattg
tatgaccggattctagggcgttatactcaaaagacggtttacgatccacaaactggcgat
gtcatcgtaccgaagaaccaaatgatcgttgaagatacggcacaacagattgttgatgct
ggtgttgaagaagtgacgattcgttcagccttcacttgtaacacggaacatggtgtttgt
gaacactgttacggtcggaacatggcgactggtgatgaagtcgaagttggtgaagcagtc
ggaacggttgctgcccaatctatcggtgaaccagggactcaattgaccatgcggaacttc
cataccggtggtgttgccgggaacgaagatattacccaagggcttccccgggttcaagaa
ttatttgaatctcggaaccctaaaggtaaagctgagattactgaagttactgggacggtt
gaatcaatcgaagaaaacccagctgaacggactaaggaaatcaccattaagggtgaagct
gatacgcggagctacacgttgccaattacggcacggatgcgggtcagtgaaggagacttc
attcaccgtggtggcgctttgaactatgggtctgttgatcctaaggaattgttgcgggtt
cgtgatgtcttgtcaactgagacgtacatcttgggtgaagtgcaacgggtttaccggatg
caaggtgtggccatcagtgataagcacgtggaaatcatggttcgtcagatgttacgtaaa
gttcggatcatggatccgggcgataccgatgtcttacctgggactttgatggatatccaa
gacttccgtcgggctaactatcagacgttgatcgatggtggcattgcggctaccgcccgt
ccagttatcttggggattacaaaggcggctttggaaactaacagtttcttatcagctgct
tctttccaagaaacgactcgggtcttgaccgatgctgctattcggggcaagaacgatcca
ttagttggtttgaaggaaaatgtcatcattgggaagattattcctgccgggactgggatg
ccagattaccgtcagatcaagcccaaagaagttggcggcacgtcaaccgaaggtgtttat
tccatcagcgacttagaaaagcaaatgcaagaagactcacaagcttag
DBGET
integrated database retrieval system
