Lachnospiraceae bacterium KM106-2: lbkm_0008
Help
Entry
lbkm_0008 CDS
T08927
Name
(GenBank) multimodular transpeptidase-transglycosylase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx00550
Peptidoglycan biosynthesis
lbx01100
Metabolic pathways
lbx01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
lbkm_0008
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
lbkm_0008
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lbx01003
]
lbkm_0008
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lbx01011
]
lbkm_0008
Enzymes [BR:
lbx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
lbkm_0008
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
lbkm_0008
Glycosyltransferases [BR:
lbx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
lbkm_0008
Peptidoglycan biosynthesis and degradation proteins [BR:
lbx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
lbkm_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BBF41334
UniProt:
A0A7U6QHX2
LinkDB
All DBs
Position
complement(3819..6578)
Genome browser
AA seq
919 aa
AA seq
DB search
MNFSKNEIAKKQRSIRSSSTRMKKKAQINGFRLFLVCVLIVISVGIASGYGVIKGLIDTA
PNIDSIDVVPTGYATFIYDNEGKVTQRLVGSSANRIYVKIDKIPDVVKNAFISIEDERFY
EHNGIDIRGIMRAFFTGVSSGGFSQGASTLTQQLLKNQVFEGGNEASFITSMQRKIQEQY
LAVQLEEKLTKDQILEYYLNTINLGANTLGVQAASQRYFNKKVEDLTLSEAAVIAGITQS
PTSLNPITNPDNNAKRRTEVLKKMLDLNYITQHQYDEAISDNVYDRINEVNNDSTKSYGY
NSYFVDELIEQVSADLQEKLGYSSTQANNLIYTGGLKIHTTQDSALQETVDSVIDDPSYY
PKDTVYELEWRFSVLHSDGTETHYSESNLKSYFLTKDEKNNIPSSQKFTLYFKNKDEAKP
YIKEYKKHVLKDGDKVEAETTNFKLQPQVSFTLMDQHTGQVKALVGGRGDKNGNRTLNRA
SNTVRQPGSTFKVLSTYLPALDTAGMTLATVQDDSEYYYPGTSKKVGNWDGSKYKGLSTL
RDAITNSMNVVTVKTLNEITPQLGFDYLKKLGFTTLVDRRVNKNGSVDSDLNLSLGLGGV
TDGVTNLELTAAYSAIANGGVYTKPVFYTKIEDRDGNLLLENKAKSTQVMKESTAWLLTN
AMEDVVKTGTGKMVRLSGTRIPVAGKTGTTSKYIDLWFAGYTPYYTATIWGGYDYGETQR
NTTYHKLIWKAIMEKIHKNLPVKDFEKPSSIVSAKICTKSGKLAVDGICNEAEGGSTVRT
EYFAQGTEPTEKCDVHVKLKICKSSNKLATKYCPEDDVEERVYLLKDETGKTADTPYILP
KGLDKTSCNVHSENSILDISPDETETPKPSNKPNNGDSQEPTPTPDPNSAPVANPNAGAV
DAITPDPNVTVTDPPQPGQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaattttagtaaaaacgaaattgctaagaagcaacgttccattcgctcatcctctaca
agaatgaaaaagaaggctcaaatcaatggttttcgtcttttccttgtatgcgtattgatc
gtgatcagcgttggaatcgcttctggttatggtgtcataaaaggactcattgatactgct
ccgaatatcgacagtatcgatgttgttccgaccggttatgcaacgtttatctatgataac
gagggaaaagtcacacaacgtcttgttggttccagcgcaaaccgaatttatgtaaaaatc
gacaaaatacctgatgttgtaaaaaatgcatttatctccattgaagatgaacgtttttat
gagcacaacggaattgatattagaggtatcatgagagccttctttactggcgtatcaagt
ggcggatttagtcaaggtgcttctacccttacccaacagttattaaagaatcaagtattc
gaaggtggtaatgaagcctctttcattacatctatgcagcgtaaaatccaagaacagtat
cttgctgttcaattagaagaaaagcttaccaaagatcagattctagaatattatctgaat
actattaacttaggtgccaatacccttggtgtacaagctgcttctcaaagatattttaat
aagaaggttgaagatcttaccttatcagaagctgctgttattgctggtattacgcaaagt
ccaacttcgttgaacccaattacgaatccggacaataacgcaaaacgtagaacggaagtt
cttaaaaagatgctagatttaaattatattacgcagcatcagtatgatgaagcaatctct
gataacgtatatgatcgtattaacgaagtaaacaacgattctactaaatcctatggatat
aactcctacttcgtagatgaattgatcgagcaagtaagtgccgatctacaagaaaagctt
ggttattcctcaacacaggcaaataatcttatttacactggtggattaaagattcataca
acacaggattctgcacttcaagaaactgttgattctgtcattgatgatccatcttattat
cctaaagatactgtttacgagttagaatggcgctttagcgtacttcacagtgatggtacc
gaaacacattactctgaatcaaacttaaagagctacttcttgactaaggatgagaagaac
aatattccttcttctcaaaaatttactttatattttaaaaacaaagatgaagcaaaacct
tatattaaagaatataagaaacatgtgttaaaagacggagataaagtagaagctgaaact
actaactttaaacttcagcctcaagtatcctttactcttatggatcagcataccggccaa
gtaaaagctcttgtcggcggacgaggcgataagaatggtaaccgtaccttaaatcgtgca
tctaacacagttcgacaacctggttccactttcaaagtattaagtacttacttaccagca
cttgatactgcaggaatgaccttagctacggttcaagatgatagcgaatattactatcct
ggtacaagcaaaaaagttggtaactgggatggaagcaaatataaagggctatctacttta
agagatgccattaccaattctatgaacgtcgttacggttaaaactttaaacgagatcact
cctcaacttggttttgattatcttaaaaaattaggattcacaactttagtcgaccgaaga
gtaaataaaaatggaagtgttgattccgatcttaacttatcccttggtcttggtggtgta
accgatggtgttaccaacttagaacttaccgctgcttattctgcaattgctaatggcggt
gtttatacaaaacctgtcttctacacaaaaattgaagaccgtgatggaaacttattatta
gaaaacaaagcaaaatcaactcaagttatgaaagaatccactgcatggcttttaacaaat
gctatggaggatgttgttaaaactggtactggtaaaatggttcgtctttctggaactaga
attcctgtagctggtaagactggtacaacttcaaaatatatcgatctatggtttgctgga
tatactccttattatacagctactatctggggcggttatgattacggcgagacacagcgt
aacacaacttaccataaattgatctggaaagcgatcatggaaaagatccataagaatctt
ccggtgaaagactttgaaaagccatcctctattgtaagtgctaagatctgtactaagagt
ggtaaacttgctgttgatggcatctgtaacgaagcagaaggcggttctactgtaagaacg
gaatacttcgcacaaggtactgaaccaactgaaaaatgtgatgttcatgttaagttaaaa
atctgcaagtcatccaataaacttgctacaaaatattgtcctgaagatgatgtagaagaa
cgtgtatatctactaaaagatgaaaccggtaaaacagcagatactccttatattctccct
aaaggattagataagacaagctgtaatgtccattcagagaactcgatcctcgatatttct
cctgatgagactgagactccaaaaccatcgaataaacctaacaacggggatagtcaggag
ccaactcctacaccggatcctaattcagcccctgtggctaatccaaatgccggtgcagtt
gatgcaattacaccagatccaaatgtaacggttacggatccaccgcagcctggacaataa
DBGET
integrated database retrieval system
