Leadbetterella byssophila: Lbys_3113
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Entry
Lbys_3113 CDS
T01350
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
lby
Leadbetterella byssophila
Pathway
lby00020
Citrate cycle (TCA cycle)
lby00480
Glutathione metabolism
lby01100
Metabolic pathways
lby01110
Biosynthesis of secondary metabolites
lby01120
Microbial metabolism in diverse environments
lby01200
Carbon metabolism
lby01210
2-Oxocarboxylic acid metabolism
lby01230
Biosynthesis of amino acids
Module
lby_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lby_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Lbys_3113
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Lbys_3113
Enzymes [BR:
lby01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Lbys_3113
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Gene cluster
GFIT
Motif
Pfam:
IDH
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
ADQ18774
UniProt:
E4RUN8
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All DBs
Position
3509351..3511609
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AA seq
752 aa
AA seq
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MFNFVDIGRQILNKMSKIIYTITDEAPALATYSFLPIVEAFTKPAGVEIETRDISLSGRI
LANFSEFLTDEQKVSDDLAYLGKLAVEPEANIIKLPNISASIPQLVAAIKELQAKGYAVP
DYPEEPKTGEETFIKAKYDKIKGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGAWSAD
SKSHVSSMTEGDFYGSEKSVVVPKATKYKITFVGADGSTKVLKEGASLQEGETVDSAVMS
YSKLNDFYAKEIEDAKAKDVLFSVHLKATMMKVSDPILFGGAVYQYFKEVYDKYATLFDE
LNINPNNGLGDLEKKIASLPEDQKAAIEADIKAVYEKNPALAMVNSDKGITNLHVPSDVI
IDASMPAAIRTSGQMWGPDGKQKDTKFVIPDRCYSGVYQTVIDFCKNNGALDPVTMGSVS
NVGLMAQAAEEYGSHDKTFQLAGAGTVQVTDEDGNVLMEQAVEAGDIFRMCQTKDAPVQD
WVKLAVNRARATNTPAIFWLDKNRAHDANLIQKVEKYLKDHDTTGLDIQIMSPAEATQYS
LERIVKGLDTISVTGNVLRDYNTDLFPILEVGTSAKMLSIVPLMNGGGLFETGAGGSAPK
HVQQFVEEGYLRWDSLGEFLALAVSLEHFAQVNNNPKAQVLADTLDEATGKFLENDKSPA
RKVGQIDNRGSHFYLALYWAQALAAQDKDAELKAIFAPIAEELTAKEAAINEELLGAQGK
PQDIGGYYKPEFAKASAAMRPSTTFNSILAKL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactttgtggatattggacgccaaattttaaataaaatgtcaaaaataatttat
accattacggacgaagcacccgctttggctacgtattcttttttacccatagtagaagct
tttaccaaaccggcaggagttgaaattgaaacccgtgatatttccctttcaggtcgtatt
ctggctaacttttcagagttcttaacagatgagcagaaggtctctgatgatttggcatat
ttagggaagttagcagttgagccggaagcgaacatcattaaacttcctaatatttcggca
tccattcctcaattagtagcggcgatcaaagaacttcaagctaaaggatatgcggttcct
gattaccctgaagaaccaaaaacgggagaagaaacctttatcaaagcgaaatacgacaag
atcaaaggttccgcagttaaccctgtattaagagaaggaaactctgaccgtagagcaccg
aaagcggtgaaagaatatgctagaaaacatccgcatagcatgggagcttggagtgcagat
tctaagtcgcacgtttcttccatgacagaaggtgatttctatggtagtgaaaaatctgta
gttgttcctaaagctactaagtataaaataaccttcgtaggagcagatggaagtactaag
gttctaaaagaaggtgcttctttacaagaaggagaaactgttgattctgctgtaatgtcc
tatagcaagttgaatgatttctacgccaaagagattgaagacgcaaaagcaaaggatgta
cttttctccgtacacttgaaagctaccatgatgaaggtttctgaccctattttatttggt
ggagctgtgtatcaatatttcaaagaagtgtatgataagtatgccactttatttgatgag
ttaaatatcaatccaaataatggtctaggtgatcttgagaagaaaatcgcaagccttcct
gaagatcaaaaggctgctattgaggctgatattaaggcagtgtacgaaaagaatcctgca
ttggcaatggtgaactctgacaagggaatcactaatcttcacgtacctagtgacgttatc
attgatgcatctatgcctgccgctatccgtacctccggacaaatgtgggggcctgacgga
aaacaaaaggatacaaaatttgttattcctgatcgttgttactctggtgtttatcaaacg
gtaattgatttttgtaaaaataatggtgctctagatcctgttactatgggttctgtatca
aacgtaggtttgatggctcaggcagcagaagaatatggttctcatgacaagactttccaa
ttagcaggtgcaggtactgttcaggttacagatgaggacggtaatgtgttaatggagcaa
gcggtagaagctggtgatatcttccgtatgtgtcaaacgaaagatgcaccggttcaggat
tgggtaaaacttgcagtaaatcgggcaagagctactaacactccagccatcttttggtta
gataagaatcgtgcacatgatgcaaatctgatccaaaaagtagagaagtatttgaaagac
catgacactacaggtttggatatccaaatcatgagccctgctgaagctacccaatactct
ttagaaaggatcgtaaaaggattagataccatttccgtaaccggaaacgtacttagagat
tacaatactgacttgttcccgatcttagaggtaggtacttccgctaaaatgctgtctatc
gtgccattgatgaacggtggtggattatttgagacaggtgcaggtggatctgctcctaaa
cacgtacagcaattcgtagaagaagggtatttaagatgggactccctaggagagtttcta
gctttagccgtttcccttgagcatttcgcacaggtaaataataatcctaaagctcaagtt
cttgcagatactctagatgaagctaccggtaagttccttgaaaatgacaagtcacctgca
agaaaagtaggacagattgataacagaggtagccacttctatttagcactatactgggct
caagcccttgctgcacaggataaagatgcagaattgaaagctatctttgctccaattgca
gaagagttgacagctaaagaagctgccatcaatgaagaattactaggggcacaaggtaaa
cctcaagacataggagggtattataaacctgagttcgctaaagcttcagcagccatgcga
ccaagcaccactttcaacagcattcttgctaagttgtaa
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