Leadbetterella byssophila: Lbys_3488
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Entry
Lbys_3488 CDS
T01350
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lby
Leadbetterella byssophila
Pathway
lby00020
Citrate cycle (TCA cycle)
lby00785
Lipoic acid metabolism
lby01100
Metabolic pathways
lby01110
Biosynthesis of secondary metabolites
lby01120
Microbial metabolism in diverse environments
lby01200
Carbon metabolism
lby01210
2-Oxocarboxylic acid metabolism
Module
lby_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lby_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Lbys_3488
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Lbys_3488
Enzymes [BR:
lby01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Lbys_3488
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ADQ19136
UniProt:
E4RYK6
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All DBs
Position
3931858..3934608
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AA seq
916 aa
AA seq
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MDQFSYIANGDVSAIEALYKQYLQDPSSVDKSWQFFFKGYEFNNTWGEGPGKAGVSSDSL
QKEREVVHLIRGYRSRGHLLSQIDPIYSKRKYNANLDLKFFGLSEADYDTVFEAGVEVFG
RPATLRELETFLKNVYGGKIGYEYLYIRDSKVKNWLRNKVESDYLNYKPSKEQKLRILGN
LNKAVAFENFLHTKFLGKKRFSLEGGESTIPALDAAIQHGAKLGVEEVVIGMAHRGRLNV
LTNIMQKPYEQVFNEFEENVPTLEFSDGDVKYHMGYSSQVETVEGHRVSLKLMANPSHLE
TVDPVVLGYARARADAHFKSEGTKYNSFDDIYDKILPIIIHGDASLAGQGVVYEVNQMSN
LPGYYVGGAIHFIINNQIGFTTDNRDARSSIYSSDVAKMLDTPILHVNGDDAEAVVYAME
LAIEFRQEFNKDIYIDMICYRKYGHNEADEPKFTQPGMYEIISKHPSPREIYIEKLKSDG
TITDNDARTLKEQFDNNLQDLLSKVKQNQLPYELPKLERDWAELRRSTVGDFDSSPRTGI
SREEIELVGKALSTVPEGFTPIKQIEKVLEERREIFAGKKPFNWAAAELLAYGSILAEEK
WVRMSGQDVQRGTFSHRHAILHDVKTYEAYNNLAHIKPNQGKFEIYNSLLSEYAVMGFEY
GYALANPNALVIWEAQFGDFANGAQIMIDQFVVAAESKWNLMNGLVLLLPHGYEGQGPEH
SNARPERFLQLAGEYNIYVCNCTTPANFFHMLRRQLALPFRKPCVHMSPKSMLRHPMAIS
DISEFETGTSFREVIGDADADPKKVKRVLLCTGKIYYDLLKRKMDSKREDIAIIRLEQLY
PLPKVQLLAELEKYAGAEQIWVQEEPLNMGYWSYLRREYPEANWDVISRKISASPATGYT
KNHNEFQNKILDKAFE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttttcatacattgcaaacggcgacgtttcggctatagaagcattatacaag
caatatttacaagatccatcctcagtagataaaagttggcaattctttttcaaaggatac
gaatttaacaatacttggggagaaggtcctgggaaagccggtgtgagcagtgatagtttg
cagaaagagagagaagtggtgcacttgattcgtggatacagatcccgcgggcatttgctg
tctcagattgatcccatttattcgaaaagaaagtacaacgctaatcttgatcttaagttt
ttcggtttgagcgaagcagactatgacaccgtttttgaagcgggtgtagaagtgtttggc
agaccggctaccttaagagaattagagactttcttgaagaatgtttatggaggtaagata
ggttacgaatatttgtatatccgtgattccaaggtgaagaattggctgaggaataaggtg
gaatcagattatttgaactataagcctagtaaggagcaaaagttaagaatccttggaaac
ttgaacaaggcagtagcttttgagaacttcttacatactaaattcttaggaaagaaaaga
ttctcactagaaggaggtgaatctaccatccctgctttagatgcggctattcagcatgga
gcaaagttaggggttgaagaagtggtgataggtatggcacatagaggtagacttaatgtg
ttgactaacatcatgcagaagccatacgagcaggtattcaatgaatttgaagagaatgtg
cctactctggagttcagtgacggtgatgttaaatatcacatgggctattcgtctcaggta
gaaacggtagaaggtcatagagtttctttgaaactgatggctaacccttcacaccttgaa
acggttgatcctgtggttctaggttatgccagagccagagctgatgctcactttaagagt
gaaggtactaagtacaattcctttgatgatatatacgacaagattttacctatcatcatc
cacggagatgcttccttagcaggtcagggtgtagtatatgaggtaaatcaaatgtctaat
ctgccgggttattatgtaggaggtgctatccacttcatcattaataaccaaatcggtttt
actacggataaccgtgacgcacgttccagcatttacagctcagatgtagcgaagatgcta
gatactcctattcttcatgtaaacggagatgatgcggaggcagtagtttatgctatggaa
ttagctattgagttccgtcaggaattcaataaagacatttatattgatatgatttgttac
cgtaaatacggacataacgaagctgatgagcctaagttcacacagccgggtatgtacgaa
atcatatctaagcatccttctccaagagagatttatattgagaaattgaaatctgatggc
actattactgataatgatgccagaaccttgaaggagcaatttgataataatcttcaagat
ctattatcaaaagtgaagcaaaatcagttgccgtatgaattgcctaaacttgagagagat
tgggcggagttaagaagatctactgtgggagattttgatagctcacctcgtacaggtatc
agcagagaagaaattgaattagtaggtaaggccttgtctactgtgcctgaaggtttcacc
ccgattaagcagattgagaaagtacttgaagaaagaagagagatatttgcaggtaagaag
ccgttcaactgggcagctgctgaacttttggcatacggttctatcctagcggaagagaaa
tgggtacgtatgtctggtcaggatgtacaaagaggtaccttctctcacagacatgctatt
ctgcatgatgtgaagacttacgaggcctacaataacctggctcacatcaagcctaatcaa
ggtaaatttgagatctataactctttactgtcagaatatgcggtaatgggatttgaatac
ggatatgctttagcaaatccaaatgcattggtgatttgggaagctcaatttggagacttt
gcaaacggtgctcaaatcatgattgaccaattcgtagtggctgcagagtccaaatggaat
ctaatgaacggtttggttctattgttgcctcatggctatgaaggtcagggaccggagcac
tcgaatgctcgtcctgaacgcttcctacaattagccggtgagtataacatttatgtatgt
aactgtactactcctgcaaacttcttccatatgttaagaagacagttggcccttccattc
cgtaagccttgcgttcatatgtctcctaaatcaatgttgagacatcctatggcgatctct
gatatttctgagttcgaaacaggaaccagcttccgtgaagtaataggagatgcagatgcg
gatccaaagaaagtgaagagagttttactttgtacaggtaagatctactatgatctattg
aaacgtaaaatggatagtaagagagaggatatagcgatcatccgcttagaacaattgtat
ccactacctaaggttcaactattggcagaacttgagaagtacgcaggagctgaacagatt
tgggttcaagaagaaccgttaaacatgggttactggtcatatcttagaagagaatatcct
gaagccaactgggacgtgatctctagaaagattagtgcttctcctgctaccggttatacg
aagaaccacaatgagttccaaaataagatcttagacaaagcatttgaataa
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