Leadbetterella byssophila: Lbys_3538
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Entry
Lbys_3538 CDS
T01350
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lby
Leadbetterella byssophila
Pathway
lby00470
D-Amino acid metabolism
lby00550
Peptidoglycan biosynthesis
lby01100
Metabolic pathways
lby01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Lbys_3538
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Lbys_3538
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Lbys_3538
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lby01011
]
Lbys_3538
Enzymes [BR:
lby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Lbys_3538
Peptidoglycan biosynthesis and degradation proteins [BR:
lby01011
]
Precursor biosynthesis
Amino acid ligase
Lbys_3538
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
GARS_A
DUF6396
Motif
Other DBs
NCBI-ProteinID:
ADQ19186
UniProt:
E4RZ68
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All DBs
Position
complement(3985536..3987293)
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AA seq
585 aa
AA seq
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MDKKIKVGIFFGGQSREREISFLGGRTAYEHLDKRFFEPVLIFVDSLGNFIHVEPSILNE
ADIRSFYPSKNQNNGYKVYIESLGPLKVSQLYKLIYKIGSQVKIEELKSYMDFAFVVMHG
PSAEDGSIQGLLEWLNIPYLGPGILGSAVGINKPFQNKLMAYATGQEKKYLTISKREWNT
SDRSKLFSSVIAKLGFPFVVKAPHQGSSIGVAIVRKRSLEEFSKAMSQCFFETFITKKEW
DKLSPRRKKNVMEKMSNLDEGIGFPVVLDGEQIYHPATLLKKLDEYLTQHEVAQLNSVNG
EDYVLIEEFISGQEFSCGVIQDDEGRVLPLPPAEVYGETATFDFKAKYKSTVSKKRIPVK
TSDANLEKIHEDVLKAFEATGMSVICRIDGFITEDDVVVLHDPNTLPGMSPSSFIFKQMA
EVGFNITNSLTYFIRQSLIERIRSGKNQFEVQQLLNHLSTQIKNAPARKRLAVLFGENEK
EFILAKKVYNELCGSEEYEPVPVCAALNGSRYIIPLNLMYKPDINEFGTAIATPKHPFIQ
KNIELVKQVRAFYAGEVDFSVRKVSEQDYNQIFKHTYDCLTGELH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaaattaaagtaggaattttttttggtggacagtcgagagaaagagaaatt
tctttcctcggtggacgtaccgcttatgagcatctggacaaacgcttttttgagccggtt
cttatctttgtagatagtttaggcaactttatacacgtagaaccttccatcttaaacgaa
gctgatattcgtagcttctacccttccaagaatcagaataatggatacaaagtttatata
gaatctctgggaccattaaaagtctctcagttgtataaactcatctataaaataggctca
caagtcaaaatagaagaattaaagtcctatatggactttgcatttgtagtaatgcatggc
ccatctgctgaagatggcagcatccagggtctattagagtggctgaatattccttacctg
ggccctggcatattaggttcagctgtaggcataaacaagcctttccaaaacaaactgatg
gcctatgctacgggccaggaaaagaaatatcttaccattagcaaaagagaatggaatact
agtgatagatctaaactattctccagtgtaattgcaaaacttggatttccatttgtagtt
aaagctccgcatcaaggatcttctataggagtagctatagtgcgaaaaagaagtctggaa
gaattctccaaagccatgtcccaatgcttctttgaaacctttataacaaagaaagaatgg
gataaactttctcctcgcagaaagaaaaacgtcatggagaagatgagcaatctggatgag
ggcataggttttccagtagtcttagatggagagcaaatctaccatccagctacacttcta
aagaagttagacgagtacttgactcagcatgaagtagcgcagctaaacagcgtaaacgga
gaagactatgtcttgattgaagagtttatcagcggtcaggaattctcttgcggagttata
caagatgacgaaggtagagttctacctttacctcccgctgaggtatatggagaaacggcc
acttttgactttaaagccaaatacaagagcactgtcagcaaaaagcgaataccggttaaa
acctctgatgctaacctagagaagatacatgaagatgtattaaaagcattcgaagccaca
ggtatgagcgtgatttgcagaattgatggtttcattacagaagacgatgtcgtggttcta
catgacccgaataccttaccgggaatgtctccatcttccttcatctttaaacaaatggcg
gaagtaggatttaatatcaccaactctctgacatacttcattcgtcaatctctaattgaa
agaataagaagcgggaaaaatcagtttgaagtacagcaacttctaaaccaccttagtacc
caaatcaaaaacgctcccgctcgtaagcgccttgccgtactatttggagaaaacgaaaag
gaattcatactggcgaagaaagtatacaatgaactttgcggaagcgaggaatacgaacct
gtaccggtatgtgctgcattaaacggatccagatatattattcctctgaatctaatgtac
aagccagatatcaatgaatttggtacggctatagccacgcctaagcaccctttcattcag
aaaaacattgaactggtaaaacaagtgagagcattctatgctggggaagtggacttctcc
gtaagaaaggtttcagaacaggattataaccaaattttcaaacatacatacgactgtcta
accggagaactgcattga
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